RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 CCDC96Q2M329 555 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 PROX2Q3B8N5 592 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 MUM1L1Q5H9M0 696 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 TSHZ3Q63HK5 1081 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 KCTD1Q719H9 257 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 RASGRP2Q7LDG7 609 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 SIRT2Q8IXJ6 389 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 OSBP2Q969R2 916 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 C1QTNF1Q9BXJ1 281 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 KATNBL1Q9H079 304 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 MTMR4Q9NYA4 1195 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 GNEQ9Y223 722 aaKnown RBP6.85□□□□□ -1.31
GYPB-208ENST00000507009 HCN4Q9Y3Q4 1203 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 MTCH2Q9Y6C9 303 aa6.85□□□□□ -1.31
GYPB-208ENST00000507009 COL4A4P53420 1690 aaPredicted RBP6.84□□□□□ -1.31
GYPB-208ENST00000507009 TNKSO95271 1327 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 M0R2C6 588 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 DPYSL4O14531 572 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 ATP2A1O14983 1001 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 GPAA1O43292 621 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 ARHGEF15O94989 841 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 ACTN1P12814 892 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 SLC1A4P43007 532 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 TFAP4Q01664 338 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 SBK1Q52WX2 424 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 SPRED2Q7Z698 418 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 TMCO2Q7Z6W1 182 aaPredicted RBP6.84□□□□□ -1.31
GYPB-208ENST00000507009 FAM160B2Q86V87 743 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 RPAP2Q8IXW5 612 aaPredicted RBP6.84□□□□□ -1.31
GYPB-208ENST00000507009 FAM133AQ8N9E0 248 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 SLC43A3Q8NBI5 491 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 RETREG2Q8NC44 543 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 OR6J1Q8NGC5 347 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 CHURC1Q8WUH1 139 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 BBXQ8WY36 941 aaPredicted RBP6.84□□□□□ -1.31
GYPB-208ENST00000507009 LRFN3Q9BTN0 628 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 LRRCC1Q9C099 1032 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 ALDH8A1Q9H2A2 487 aaPredicted RBP6.84□□□□□ -1.31
GYPB-208ENST00000507009 ZNF287Q9HBT7 754 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 EPB41L4AQ9HCS5 686 aaPredicted RBP6.84□□□□□ -1.31
GYPB-208ENST00000507009 CYP39A1Q9NYL5 469 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 MTUS1Q9ULD2 1270 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 CCPG1Q9ULG6 757 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 STX8Q9UNK0 236 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 NOD1Q9Y239 953 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 BDP1A6H8Y1 2624 aa6.84□□□□□ -1.31
GYPB-208ENST00000507009 CHD7Q9P2D1 2997 aa6.84□□□□□ -1.32
GYPB-208ENST00000507009 ZNF536O15090 1300 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 IGKV6D-41A0A0C4DH26 115 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 PTPDC1A2A3K4 754 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 TSPY2A6NKD2 308 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 ERC2O15083 957 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 RNF113AO15541 343 aaKnown RBP6.83□□□□□ -1.32
GYPB-208ENST00000507009 TLL1O43897 1013 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 SUPT20HL2P0C7V6 817 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 CALML3P27482 149 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 SLC16A2P36021 539 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 KCNJ6P48051 423 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 OAZ1P54368 228 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 BAATQ14032 418 aaPredicted RBP6.83□□□□□ -1.32
GYPB-208ENST00000507009 NBPF20Q3BBV1 942 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 TMEM31Q5JXX7 168 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 IQSEC1Q6DN90 963 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 TAPT1Q6NXT6 567 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 FAM117BQ6P1L5 589 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 GMCL1P1Q8NEA9 526 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 GDPD5Q8WTR4 605 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 STAG1Q8WVM7 1258 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 APPBP2Q92624 585 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 HLA-CQ95604 372 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 UIMC1Q96RL1 719 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 CRBNQ96SW2 442 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 WDR11Q9BZH6 1224 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 NAPBQ9H115 298 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 INCENPQ9NQS7 918 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 TOMM22Q9NS69 142 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 POLR3EQ9NVU0 708 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 RABGEF1Q9UJ41 708 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 PRR12Q9ULL5 1215 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 LCTP09848 1927 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 MUC3AQ02505 3323 aa6.83□□□□□ -1.32
GYPB-208ENST00000507009 FRMPD2Q68DX3 1309 aaPredicted RBP6.82□□□□□ -1.32
GYPB-208ENST00000507009 KIF28PB7ZC32 967 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 NMT2O60551 498 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 SLC3A2P08195 630 aaKnown RBP6.82□□□□□ -1.32
GYPB-208ENST00000507009 PFKMP08237 780 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 FDX1P10109 184 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 CPT1AP50416 773 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 ALDH5A1P51649 535 aaPredicted RBP6.82□□□□□ -1.32
GYPB-208ENST00000507009 PURAQ00577 322 aaKnown RBP6.82□□□□□ -1.32
GYPB-208ENST00000507009 TAP1Q03518 808 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 CTDSPL2Q05D32 466 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 PDE4BQ07343 736 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 GRB10Q13322 594 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 TKFCQ3LXA3 575 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 TTBK2Q6IQ55 1244 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 GIMAP6Q6P9H5 292 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 SLC30A10Q6XR72 485 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 HERC6Q8IVU3 1022 aa6.82□□□□□ -1.32
GYPB-208ENST00000507009 IFNL3Q8IZI9 196 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms