RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 SCG2P13521 617 aa20.94■□□□□ 0.94
NPHP4-210ENST00000506941 USP17L6PQ6QN14 398 aa20.94■□□□□ 0.94
NPHP4-210ENST00000506941 EEPD1Q7L9B9 569 aa20.94■□□□□ 0.94
NPHP4-210ENST00000506941 NECAB1Q8N987 351 aa20.94■□□□□ 0.94
NPHP4-210ENST00000506941 NSUN6Q8TEA1 469 aaKnown RBP20.94■□□□□ 0.94
NPHP4-210ENST00000506941 BARHL2Q9NY43 387 aa20.94■□□□□ 0.94
NPHP4-210ENST00000506941 hCG_1984214I3L0E3 225 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 PIK3CDO00329 1044 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 CPLX1O14810 134 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 DTNBO60941 627 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 EIF2AK2P19525 551 aaKnown RBP20.93■□□□□ 0.94
NPHP4-210ENST00000506941 RGS19P49795 217 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 MNX1P50219 401 aaPredicted RBP20.93■□□□□ 0.94
NPHP4-210ENST00000506941 NAPAP54920 295 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 CCDC144BQ3MJ40 725 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 TAPT1Q6NXT6 567 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 PPP1R18Q6NYC8 613 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 FCHSD1Q86WN1 690 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 ZNF713Q8N859 430 aaPredicted RBP20.93■□□□□ 0.94
NPHP4-210ENST00000506941 PSTPIP2Q9H939 334 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 PDGFCQ9NRA1 345 aa20.93■□□□□ 0.94
NPHP4-210ENST00000506941 MSCO60682 206 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 CTDNEP1O95476 244 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 AKR1A1P14550 325 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 PDE4DQ08499 809 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 ST3GAL1Q11201 340 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 RABEP1Q15276 862 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 UBE2SQ16763 222 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 ARHGEF16Q5VV41 709 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 IL31RAQ8NI17 732 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 GTF3C6Q969F1 213 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 VTA1Q9NP79 307 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 RBM27Q9P2N5 1060 aaKnown RBP20.92■□□□□ 0.94
NPHP4-210ENST00000506941 FRMPD4Q14CM0 1322 aa20.92■□□□□ 0.94
NPHP4-210ENST00000506941 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.91■□□□□ 0.94
NPHP4-210ENST00000506941 SSRP1Q08945 709 aaKnown RBP20.91■□□□□ 0.94
NPHP4-210ENST00000506941 TMEM63BQ5T3F8 832 aa20.91■□□□□ 0.94
NPHP4-210ENST00000506941 UBE2Q1Q7Z7E8 422 aa20.91■□□□□ 0.94
NPHP4-210ENST00000506941 SMARCC2Q8TAQ2 1214 aa20.91■□□□□ 0.94
NPHP4-210ENST00000506941 IWS1Q96ST2 819 aa20.91■□□□□ 0.94
NPHP4-210ENST00000506941 PDCD2LQ9BRP1 358 aa20.91■□□□□ 0.94
NPHP4-210ENST00000506941 FAM184BQ9ULE4 1060 aa20.91■□□□□ 0.94
NPHP4-210ENST00000506941 ADAMTS3O15072 1205 aa20.9■□□□□ 0.94
NPHP4-210ENST00000506941 PTGS1P23219 599 aa20.9■□□□□ 0.94
NPHP4-210ENST00000506941 ADCYAP1R1P41586 468 aa20.9■□□□□ 0.94
NPHP4-210ENST00000506941 AKAP17AQ02040 695 aaKnown RBP20.9■□□□□ 0.94
NPHP4-210ENST00000506941 PGM5Q15124 567 aa20.9■□□□□ 0.94
NPHP4-210ENST00000506941 TRIM22Q8IYM9 498 aa20.9■□□□□ 0.94
NPHP4-210ENST00000506941 DIS3LQ8TF46 1054 aaKnown RBP20.9■□□□□ 0.94
NPHP4-210ENST00000506941 CUL5Q93034 780 aa20.9■□□□□ 0.94
NPHP4-210ENST00000506941 MPHOSPH6Q99547 160 aaKnown RBP20.9■□□□□ 0.94
NPHP4-210ENST00000506941 RIC8AQ9NPQ8 531 aa20.9■□□□□ 0.94
NPHP4-210ENST00000506941 LIMCH1Q9UPQ0 1083 aa20.9■□□□□ 0.94
NPHP4-210ENST00000506941 B4DLN1 442 aa20.89■□□□□ 0.93
NPHP4-210ENST00000506941 FARP2O94887 1054 aaPredicted RBP20.89■□□□□ 0.93
NPHP4-210ENST00000506941 NR3C2P08235 984 aa20.89■□□□□ 0.93
NPHP4-210ENST00000506941 RARBP10826 455 aa20.89■□□□□ 0.93
NPHP4-210ENST00000506941 ADCY7P51828 1080 aa20.89■□□□□ 0.93
NPHP4-210ENST00000506941 MRPL12P52815 198 aaKnown RBP20.89■□□□□ 0.93
NPHP4-210ENST00000506941 CPLX2Q6PUV4 134 aaKnown RBP20.89■□□□□ 0.93
NPHP4-210ENST00000506941 AIFM3Q96NN9 605 aa20.89■□□□□ 0.93
NPHP4-210ENST00000506941 PDE4DIPQ5VU43 2346 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 STK36Q9NRP7 1315 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 SYNRGQ9UMZ2 1314 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 RBM47A0AV96 593 aaKnown RBP20.88■□□□□ 0.93
NPHP4-210ENST00000506941 SMCO2A6NFE2 343 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 CD2BP2O95400 341 aaKnown RBP20.88■□□□□ 0.93
NPHP4-210ENST00000506941 DEXIO95424 95 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 SMPD1P17405 629 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 STXBP2Q15833 593 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 ANKLE1Q8NAG6 615 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 XPNPEP3Q9NQH7 507 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 VPS54Q9P1Q0 977 aa20.88■□□□□ 0.93
NPHP4-210ENST00000506941 ESYT2A0FGR8 921 aa20.87■□□□□ 0.93
NPHP4-210ENST00000506941 ADAMTS4O75173 837 aa20.87■□□□□ 0.93
NPHP4-210ENST00000506941 DUSP11O75319 330 aaKnown RBP20.87■□□□□ 0.93
NPHP4-210ENST00000506941 CDKL5O76039 1030 aa20.87■□□□□ 0.93
NPHP4-210ENST00000506941 PGK1P00558 417 aa20.87■□□□□ 0.93
NPHP4-210ENST00000506941 MYCLP12524 364 aaPredicted RBP20.87■□□□□ 0.93
NPHP4-210ENST00000506941 CAPN2P17655 700 aa20.87■□□□□ 0.93
NPHP4-210ENST00000506941 IRX5P78411 483 aaPredicted RBP20.87■□□□□ 0.93
NPHP4-210ENST00000506941 TNFAIP2Q03169 654 aa20.87■□□□□ 0.93
NPHP4-210ENST00000506941 GJC2Q5T442 439 aaPredicted RBP20.87■□□□□ 0.93
NPHP4-210ENST00000506941 VSIG10LQ86VR7 867 aa20.87■□□□□ 0.93
NPHP4-210ENST00000506941 ZFP91Q96JP5 570 aaPredicted RBP20.87■□□□□ 0.93
NPHP4-210ENST00000506941 ZMYND12Q9H0C1 365 aa20.87■□□□□ 0.93
NPHP4-210ENST00000506941 GNEQ9Y223 722 aaKnown RBP20.87■□□□□ 0.93
NPHP4-210ENST00000506941 RGS20O76081 388 aa20.86■□□□□ 0.93
NPHP4-210ENST00000506941 CLK2P49760 499 aaKnown RBP20.86■□□□□ 0.93
NPHP4-210ENST00000506941 MRPS9P82933 396 aaKnown RBP20.86■□□□□ 0.93
NPHP4-210ENST00000506941 LRRC41Q15345 812 aa20.86■□□□□ 0.93
NPHP4-210ENST00000506941 IQSEC1Q6DN90 963 aa20.86■□□□□ 0.93
NPHP4-210ENST00000506941 NSUN7Q8NE18 718 aaKnown RBP20.86■□□□□ 0.93
NPHP4-210ENST00000506941 PAWRQ96IZ0 340 aaKnown RBP20.86■□□□□ 0.93
NPHP4-210ENST00000506941 UPF3AQ9H1J1 476 aaKnown RBP20.86■□□□□ 0.93
NPHP4-210ENST00000506941 TMEM260Q9NX78 707 aa20.86■□□□□ 0.93
NPHP4-210ENST00000506941 MYADML2A6NDP7 307 aa20.85■□□□□ 0.93
NPHP4-210ENST00000506941 JAK2O60674 1132 aa20.85■□□□□ 0.93
NPHP4-210ENST00000506941 EIF3JO75822 258 aaKnown RBP20.85■□□□□ 0.93
NPHP4-210ENST00000506941 ARIH2O95376 493 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms