RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 GJC2Q5T442 439 aaPredicted RBP19.22■□□□□ 0.67
SNCA-209ENST00000506244 SMARCC2Q8TAQ2 1214 aa19.22■□□□□ 0.67
SNCA-209ENST00000506244 SCFD2Q8WU76 684 aa19.22■□□□□ 0.67
SNCA-209ENST00000506244 LENG1Q96BZ8 264 aaPredicted RBP19.22■□□□□ 0.67
SNCA-209ENST00000506244 ZNF274Q96GC6 653 aaPredicted RBP19.22■□□□□ 0.67
SNCA-209ENST00000506244 UPF3AQ9H1J1 476 aaKnown RBP19.22■□□□□ 0.67
SNCA-209ENST00000506244 FAM217BQ9NTX9 383 aaPredicted RBP19.22■□□□□ 0.67
SNCA-209ENST00000506244 hCG_1642624A0A1W2PR95 340 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 PIK3CDO00329 1044 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 NKRFO15226 690 aaKnown RBP eCLIP19.21■□□□□ 0.67
SNCA-209ENST00000506244 ADAMTS4O75173 837 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 PGK1P00558 417 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 EIF2AK2P19525 551 aaKnown RBP19.21■□□□□ 0.67
SNCA-209ENST00000506244 CST5P28325 142 aaPredicted RBP19.21■□□□□ 0.67
SNCA-209ENST00000506244 ADD1P35611 737 aaKnown RBP19.21■□□□□ 0.67
SNCA-209ENST00000506244 NAPAP54920 295 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 GJA9P57773 515 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 TAPT1Q6NXT6 567 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 CPLX2Q6PUV4 134 aaKnown RBP19.21■□□□□ 0.67
SNCA-209ENST00000506244 TLK2Q86UE8 772 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 PCSK9Q8NBP7 692 aaKnown RBP19.21■□□□□ 0.67
SNCA-209ENST00000506244 DPF3Q92784 378 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 TSEN34Q9BSV6 310 aaKnown RBP19.21■□□□□ 0.67
SNCA-209ENST00000506244 AP5M1Q9H0R1 490 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 GLT8D2Q9H1C3 349 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 ALDH8A1Q9H2A2 487 aaPredicted RBP19.21■□□□□ 0.67
SNCA-209ENST00000506244 PSTPIP2Q9H939 334 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 UPF2Q9HAU5 1272 aaKnown RBP19.21■□□□□ 0.67
SNCA-209ENST00000506244 Q9Y3F1 56 aa19.21■□□□□ 0.67
SNCA-209ENST00000506244 V9GY48 417 aaPredicted RBP19.21■□□□□ 0.67
SNCA-209ENST00000506244 RBM47A0AV96 593 aaKnown RBP19.2■□□□□ 0.66
SNCA-209ENST00000506244 MOXD2PA6NHM9 499 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 CPLX1O14810 134 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 SEC24BO95487 1268 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 C6orf222P0C671 652 aaPredicted RBP19.2■□□□□ 0.66
SNCA-209ENST00000506244 CCND2P30279 289 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 TTLL4Q14679 1199 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 DUSP28Q4G0W2 176 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 WWC2Q6AWC2 1192 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 FCHSD1Q86WN1 690 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 CCDC12Q8WUD4 166 aaPredicted RBP19.2■□□□□ 0.66
SNCA-209ENST00000506244 GPKOWQ92917 476 aaPredicted RBP eCLIP19.2■□□□□ 0.66
SNCA-209ENST00000506244 PDCD2LQ9BRP1 358 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 RNF26Q9BY78 433 aaPredicted RBP19.2■□□□□ 0.66
SNCA-209ENST00000506244 WDR11Q9BZH6 1224 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 PHF24Q9UPV7 400 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 NR2E3Q9Y5X4 410 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 DDX49Q9Y6V7 483 aaKnown RBP19.2■□□□□ 0.66
SNCA-209ENST00000506244 FRMPD4Q14CM0 1322 aa19.2■□□□□ 0.66
SNCA-209ENST00000506244 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.19■□□□□ 0.66
SNCA-209ENST00000506244 ADCY6O43306 1168 aa19.19■□□□□ 0.66
SNCA-209ENST00000506244 EVI5O60447 810 aa19.19■□□□□ 0.66
SNCA-209ENST00000506244 EIF3JO75822 258 aaKnown RBP19.19■□□□□ 0.66
SNCA-209ENST00000506244 NR3C2P08235 984 aa19.19■□□□□ 0.66
SNCA-209ENST00000506244 IFNAR1P17181 557 aa19.19■□□□□ 0.66
SNCA-209ENST00000506244 SMPD1P17405 629 aa19.19■□□□□ 0.66
SNCA-209ENST00000506244 TRIM22Q8IYM9 498 aa19.19■□□□□ 0.66
SNCA-209ENST00000506244 SENP6Q9GZR1 1112 aaPredicted RBP19.19■□□□□ 0.66
SNCA-209ENST00000506244 EHMT1Q9H9B1 1298 aa19.19■□□□□ 0.66
SNCA-209ENST00000506244 PDGFCQ9NRA1 345 aa19.19■□□□□ 0.66
SNCA-209ENST00000506244 BARHL2Q9NY43 387 aa19.19■□□□□ 0.66
SNCA-209ENST00000506244 GNEQ9Y223 722 aaKnown RBP19.19■□□□□ 0.66
SNCA-209ENST00000506244 ZEB2O60315 1214 aa19.18■□□□□ 0.66
SNCA-209ENST00000506244 STAM2O75886 525 aa19.18■□□□□ 0.66
SNCA-209ENST00000506244 CDKL5O76039 1030 aa19.18■□□□□ 0.66
SNCA-209ENST00000506244 SCG2P13521 617 aa19.18■□□□□ 0.66
SNCA-209ENST00000506244 NKX3-2P78367 333 aa19.18■□□□□ 0.66
SNCA-209ENST00000506244 CCT2P78371 535 aaKnown RBP19.18■□□□□ 0.66
SNCA-209ENST00000506244 PGM5Q15124 567 aa19.18■□□□□ 0.66
SNCA-209ENST00000506244 PFKFB3Q16875 520 aaPredicted RBP19.18■□□□□ 0.66
SNCA-209ENST00000506244 PRPF38BQ5VTL8 546 aaKnown RBP19.18■□□□□ 0.66
SNCA-209ENST00000506244 KLHDC9Q8NEP7 349 aa19.18■□□□□ 0.66
SNCA-209ENST00000506244 TNRC18O15417 2968 aaPredicted RBP19.17■□□□□ 0.66
SNCA-209ENST00000506244 SPDYE3A6NKU9 549 aa19.17■□□□□ 0.66
SNCA-209ENST00000506244 MEIS2O14770 477 aa19.17■□□□□ 0.66
SNCA-209ENST00000506244 PRPF3O43395 683 aaKnown RBP19.17■□□□□ 0.66
SNCA-209ENST00000506244 MYCLP12524 364 aaPredicted RBP19.17■□□□□ 0.66
SNCA-209ENST00000506244 ADCY7P51828 1080 aa19.17■□□□□ 0.66
SNCA-209ENST00000506244 FSCN1Q16658 493 aaKnown RBP19.17■□□□□ 0.66
SNCA-209ENST00000506244 BRDTQ58F21 947 aaPredicted RBP19.17■□□□□ 0.66
SNCA-209ENST00000506244 XRRA1Q6P2D8 792 aa19.17■□□□□ 0.66
SNCA-209ENST00000506244 KCNV1Q6PIU1 500 aa19.17■□□□□ 0.66
SNCA-209ENST00000506244 USP17L6PQ6QN14 398 aa19.17■□□□□ 0.66
SNCA-209ENST00000506244 NCOA5Q9HCD5 579 aaKnown RBP19.17■□□□□ 0.66
SNCA-209ENST00000506244 KIAA1217Q5T5P2 1943 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 A0A1W2PQ45 241 aaPredicted RBP19.16■□□□□ 0.66
SNCA-209ENST00000506244 A0A1W2PQY0 241 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 STXBP3O00186 592 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 TXNP10599 105 aaKnown RBP19.16■□□□□ 0.66
SNCA-209ENST00000506244 CPT1AP50416 773 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 ACLYP53396 1101 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 AK2P54819 239 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 NTRK3Q16288 839 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 GNPTABQ3T906 1256 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 GNASQ5JWF2 1037 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 SEPT14Q6ZU15 432 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 CCDC148Q8NFR7 591 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 PHKBQ93100 1093 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 GLT1D1Q96MS3 346 aa19.16■□□□□ 0.66
SNCA-209ENST00000506244 SLC26A6Q9BXS9 759 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms