RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 GNL2Q13823 731 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 ZSCAN23Q3MJ62 389 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 TMEM214Q6NUQ4 689 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 KRT28Q7Z3Y7 464 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 LILRB2Q8N423 598 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 TTC13Q8NBP0 860 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 BHMTQ93088 406 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 YIPF4Q9BSR8 244 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ISCA1Q9BUE6 129 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 PRKD2Q9BZL6 878 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 PCDH12Q9NPG4 1184 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 DKK3Q9UBP4 350 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 PCDHB2Q9Y5E7 798 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 KAT6BQ8WYB5 2073 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 FAM25EA8MYX2 175 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 TNFRSF10AO00220 468 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 BIN1O00499 593 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 TBX1O43435 398 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 CCDC159P0C7I6 412 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 HDAC4P56524 1084 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 TDGQ13569 410 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 BEND6Q5SZJ8 279 aaPredicted RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 ANKRD45Q5TZF3 282 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 HHATQ5VTY9 493 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 CWF19L1Q69YN2 538 aaKnown RBP2.58□□□□□ -2
NEDD4-205ENST00000506154 PLBD1Q6P4A8 553 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 POTEEQ6S8J3 1075 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 TCP11L2Q8N4U5 519 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 PPM1EQ8WY54 764 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 ASB16Q96NS5 453 aa2.58□□□□□ -2
NEDD4-205ENST00000506154 EIF3FO00303 357 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 ARHGAP33O14559 1287 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 BPNT1O95861 308 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ALDH1A1P00352 501 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 CCNYL3P0C7X3 344 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TCF7P36402 384 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 ZAP70P43403 619 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 FXR1P51114 621 aaKnown RBP eCLIP2.57□□□□□ -2
NEDD4-205ENST00000506154 TMEM62Q0P6H9 643 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PDE3AQ14432 1141 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 MYLK3Q32MK0 819 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SLC10A5Q5PT55 438 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TADA2BQ86TJ2 420 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SPATS2Q86XZ4 545 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 MFN1Q8IWA4 741 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 GRIN3AQ8TCU5 1115 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 C7orf43Q8WVR3 580 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 OXCT2Q9BYC2 517 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 EBF2Q9HAK2 575 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 NLRP2Q9NX02 1062 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TMOD4Q9NZQ9 345 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SFMBT1Q9UHJ3 866 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PUF60Q9UHX1 559 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 WDR37Q9Y2I8 494 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PLSCR1O15162 318 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SCGB1D2O95969 90 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 MYCP01106 439 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 MMEP08473 750 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PDGFRBP09619 1106 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 NAT2P11245 290 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ALADP13716 330 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 VCAM1P19320 739 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 LMNB1P20700 586 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 CLK1P49759 484 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 ECM1Q16610 540 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 BEND3Q5T5X7 828 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ANO1Q5XXA6 986 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PPP2R2DQ66LE6 453 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 CREB3L3Q68CJ9 461 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 BICDL1Q6ZP65 573 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TREML1Q86YW5 311 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ANKRD18AQ8IVF6 992 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TRIM42Q8IWZ5 723 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 LRRC43Q8N309 656 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 SLC39A7Q92504 469 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TMX3Q96JJ7 454 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 CAMKK2Q96RR4 588 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ZIM2Q9NZV7 527 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TUBGCP4Q9UGJ1 667 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 GGA2Q9UJY4 613 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 PLXNA1Q9UIW2 1896 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 RNMTO43148 476 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 PRPF6O94906 941 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 IGKV5-2P06315 115 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 LIFRP42702 1097 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 POU5F1Q01860 360 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 FKBP4Q02790 459 aaKnown RBP eCLIP2.57□□□□□ -2
NEDD4-205ENST00000506154 ARMC3Q5W041 872 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 C16orf46Q6P387 395 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 RBM43Q6ZSC3 357 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 ZNF771Q7L3S4 317 aaPredicted RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 METTL16Q86W50 562 aaKnown RBP2.57□□□□□ -2
NEDD4-205ENST00000506154 GALNT15Q8N3T1 639 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 TSPYL6Q8N831 410 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 BRF1Q92994 677 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 FERD3LQ96RJ6 166 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 CORO1BQ9BR76 489 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 MINPP1Q9UNW1 487 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 ZNF804BA4D1E1 1349 aa2.57□□□□□ -2
NEDD4-205ENST00000506154 AK9Q5TCS8 1911 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms