RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 FOXD4L5Q5VV16 416 aaPredicted RBP8.22□□□□□ -1.09
NUP54-204ENST00000506098 JAKMIP3Q5VZ66 844 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 MOXD1Q6UVY6 613 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 PIK3AP1Q6ZUJ8 805 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 NCAPG2Q86XI2 1143 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 DNERQ8NFT8 737 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 SYTL5Q8TDW5 730 aaPredicted RBP8.22□□□□□ -1.09
NUP54-204ENST00000506098 TBCKQ8TEA7 893 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 FOXD4L4Q8WXT5 416 aaPredicted RBP8.22□□□□□ -1.09
NUP54-204ENST00000506098 ARID3AQ99856 593 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 ANO3Q9BYT9 981 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 PORCNQ9H237 461 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 R3HDMLQ9H3Y0 253 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 HOMER2Q9NSB8 354 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 POLR3EQ9NVU0 708 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 TMEM260Q9NX78 707 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 COL20A1Q9P218 1284 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 CPA4Q9UI42 421 aa8.22□□□□□ -1.09
NUP54-204ENST00000506098 TRIP12Q14669 1992 aaPredicted RBP8.22□□□□□ -1.09
NUP54-204ENST00000506098 CYP3A7-CYP3A51PA0A087WV96 503 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 LOC102724159A0A0B4J2E5 919 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 SPDYE3A6NKU9 549 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 BAG4O95429 457 aaKnown RBP8.21□□□□□ -1.1
NUP54-204ENST00000506098 FCER1AP12319 257 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 CYP3A7P24462 503 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 CIITAP33076 1130 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 NASPP49321 788 aaPredicted RBP8.21□□□□□ -1.1
NUP54-204ENST00000506098 PWP2Q15269 919 aaKnown RBP8.21□□□□□ -1.1
NUP54-204ENST00000506098 INF2Q27J81 1249 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 PPP4R3AQ6IN85 833 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 FAM173BQ6P4H8 233 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 NSMFQ6X4W1 530 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 SLC30A10Q6XR72 485 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 NEK8Q86SG6 692 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 ANKRD35Q8N283 1001 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 FAM133AQ8N9E0 248 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 MBOAT7Q96N66 472 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 ZNF396Q96N95 335 aaPredicted RBP8.21□□□□□ -1.1
NUP54-204ENST00000506098 TAAR1Q96RJ0 339 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 NAP1L4Q99733 375 aaKnown RBP8.21□□□□□ -1.1
NUP54-204ENST00000506098 EHMT1Q9H9B1 1298 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 EFCC1Q9HA90 598 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 PXMP2Q9NR77 195 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
NUP54-204ENST00000506098 RNF186Q9NXI6 227 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 SAGE1Q9NXZ1 904 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 RTEL1Q9NZ71 1219 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 CFAP45Q9UL16 551 aa8.21□□□□□ -1.1
NUP54-204ENST00000506098 NOL7Q9UMY1 257 aaKnown RBP8.21□□□□□ -1.1
NUP54-204ENST00000506098 SLC15A5A6NIM6 579 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 WNT7AO00755 349 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 GCFC2P16383 781 aaKnown RBP8.2□□□□□ -1.1
NUP54-204ENST00000506098 CDK11BP21127 795 aaKnown RBP8.2□□□□□ -1.1
NUP54-204ENST00000506098 PTPREP23469 700 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 KRT85P78386 507 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 ARHGAP4P98171 946 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 DNM1Q05193 864 aaKnown RBP8.2□□□□□ -1.1
NUP54-204ENST00000506098 GRB14Q14449 540 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 PGM5Q15124 567 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 PTPAQ15257 358 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 TTC38Q5R3I4 469 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 ANO1Q5XXA6 986 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 PCNX4Q63HM2 1172 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 XRRA1Q6P2D8 792 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 GPR142Q7Z601 462 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 PLEKHH3Q7Z736 793 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 FCHSD1Q86WN1 690 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 DNAJC5GQ8N7S2 189 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 PGBD1Q96JS3 809 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 USP28Q96RU2 1077 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 IWS1Q96ST2 819 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 MMP19Q99542 508 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 RCOR1Q9UKL0 485 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 DIS3Q9Y2L1 958 aaKnown RBP8.2□□□□□ -1.1
NUP54-204ENST00000506098 PCDHB6Q9Y5E3 794 aa8.2□□□□□ -1.1
NUP54-204ENST00000506098 POTEB2H3BUK9 544 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 LAD1O00515 517 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 TRPA1O75762 1119 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 STAM2O75886 525 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 YEATS4O95619 227 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 TBC1D8O95759 1140 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 BMP15O95972 392 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 EDNRBP24530 442 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 ALDH5A1P51649 535 aaPredicted RBP8.19□□□□□ -1.1
NUP54-204ENST00000506098 CNTN2Q02246 1040 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 MAP2K1Q02750 393 aaPredicted RBP8.19□□□□□ -1.1
NUP54-204ENST00000506098 KCTD2Q14681 263 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 SLC39A14Q15043 492 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 SF3A1Q15459 793 aaKnown RBP8.19□□□□□ -1.1
NUP54-204ENST00000506098 ZNF792Q3KQV3 632 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 Q4G0T1 1027 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 MORN1Q5T089 497 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 NIPA1Q7RTP0 329 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 ZNF467Q7Z7K2 595 aaPredicted RBP8.19□□□□□ -1.1
NUP54-204ENST00000506098 VSIG10LQ86VR7 867 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 C4orf32Q8N8J7 132 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 TMEM87AQ8NBN3 555 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 LINC00301Q8NCQ3 95 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 MORC4Q8TE76 937 aa8.19□□□□□ -1.1
NUP54-204ENST00000506098 NSUN6Q8TEA1 469 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms