RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 FAM114A1Q8IWE2 563 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 LARP4BQ92615 738 aaKnown RBP19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 PANX2Q96RD6 677 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 PDGFDQ9GZP0 370 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 LTBP3Q9NS15 1303 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 EDIL3O43854 480 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 STX17P56962 302 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 PSMD2Q13200 908 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 GRB10Q13322 594 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 Q4G0T1 1027 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 SMYD4Q8IYR2 804 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 SNX29Q8TEQ0 813 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 PCDHA12Q9UN75 941 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 COL4A5P29400 1685 aa19.37■□□□□ 0.69
TRAPPC11-204ENST00000505676 SPDYE3A6NKU9 549 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 ZSCAN12O43309 604 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 PBX1P40424 430 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 ASIC1P78348 528 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 UNC13DQ70J99 1090 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 PPFIBP1Q86W92 1011 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 KCNMB3Q9NPA1 279 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 CLRN2A0PK11 232 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 MEIS2O14770 477 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 CIITAP33076 1130 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 SREBF1P36956 1147 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 CXCL9Q07325 125 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 CRYGNQ8WXF5 182 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 RAD54LQ92698 747 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 C16orf45Q96MC5 204 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 EHMT1Q9H9B1 1298 aa19.36■□□□□ 0.69
TRAPPC11-204ENST00000505676 ASNSP08243 561 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 CCNE1P24864 410 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 PDE4DQ08499 809 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 TCP11X2Q5H9J9 407 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 HAUS3Q68CZ6 603 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 CNGA4Q8IV77 575 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 FAM20AQ96MK3 541 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 VCPKMTQ9H867 229 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 MAGEC2Q9UBF1 373 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 PRR12Q9ULL5 1215 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 GDAQ9Y2T3 454 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 FER1L6Q2WGJ9 1857 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 KCNJ18B7U540 433 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 AKR1B15C9JRZ8 316 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 CYP3A4P08684 503 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 ZNF280AP59817 542 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 KCNJ12Q14500 433 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 CEP135Q66GS9 1140 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 ERMNQ8TAM6 284 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 HAS1Q92839 578 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 PNMA5Q96PV4 448 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 BAG1Q99933 345 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 VEZTQ9HBM0 779 aa19.35■□□□□ 0.69
TRAPPC11-204ENST00000505676 FGFR1OPO95684 399 aaKnown RBP19.34■□□□□ 0.69
TRAPPC11-204ENST00000505676 SLURP2P0DP57 97 aa19.34■□□□□ 0.69
TRAPPC11-204ENST00000505676 CAP2P40123 477 aa19.34■□□□□ 0.69
TRAPPC11-204ENST00000505676 ARHGAP4P98171 946 aa19.34■□□□□ 0.69
TRAPPC11-204ENST00000505676 E4F1Q66K89 784 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC11-204ENST00000505676 BMP2KQ9NSY1 1161 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC11-204ENST00000505676 BLOC1S4Q9NUP1 217 aa19.34■□□□□ 0.69
TRAPPC11-204ENST00000505676 FEM1BQ9UK73 627 aa19.34■□□□□ 0.69
TRAPPC11-204ENST00000505676 A0A1W2PRG0 241 aa19.33■□□□□ 0.69
TRAPPC11-204ENST00000505676 COPB1P53618 953 aaKnown RBP19.33■□□□□ 0.69
TRAPPC11-204ENST00000505676 RRP1BQ14684 758 aaKnown RBP19.33■□□□□ 0.69
TRAPPC11-204ENST00000505676 KRT31Q15323 416 aa19.33■□□□□ 0.69
TRAPPC11-204ENST00000505676 SHROOM1Q2M3G4 852 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC11-204ENST00000505676 P2RX5Q93086 422 aa19.33■□□□□ 0.69
TRAPPC11-204ENST00000505676 MYOZ2Q9NPC6 264 aa19.33■□□□□ 0.69
TRAPPC11-204ENST00000505676 PNMA2Q9UL42 364 aa19.33■□□□□ 0.69
TRAPPC11-204ENST00000505676 ZBTB12Q9Y330 459 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC11-204ENST00000505676 USP17L15C9J2P7 530 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP17L13C9JLJ4 530 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP17L11C9JVI0 530 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP17L18D6R9N7 530 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP17L22D6RA61 530 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP17L17D6RBQ6 530 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP17L19D6RCP7 530 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP17L20D6RJB6 530 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 N4BP3O15049 544 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP17L24Q0WX57 530 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP17L6PQ6QN14 398 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 IQCDQ96DY2 449 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 RANBP17Q9H2T7 1088 aaKnown RBP19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 RABGAP1Q9Y3P9 1069 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 CD2APQ9Y5K6 639 aa19.33■□□□□ 0.68
TRAPPC11-204ENST00000505676 BRCA1P38398 1863 aaKnown RBP19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 A0A1W2PQC6 194 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 JAG1P78504 1218 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 TTI2Q6NXR4 508 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 TC2NQ8N9U0 490 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 KIF18AQ8NI77 898 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 TRIM47Q96LD4 638 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 PLIN2Q99541 437 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 PGAP2Q9UHJ9 254 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 MRPL11Q9Y3B7 192 aaKnown RBP19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 MYH7BA7E2Y1 1941 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 WNT10BO00744 389 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 HSP90AA4PQ58FG1 418 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 LRRC15Q8TF66 581 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 PPP1R13BQ96KQ4 1090 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms