RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 PXMP2Q9NR77 195 aa10.06□□□□□ -0.8
CTSB-205ENST00000505496 V9GY48 417 aaPredicted RBP10.06□□□□□ -0.8
CTSB-205ENST00000505496 SYNRGQ9UMZ2 1314 aa10.06□□□□□ -0.8
CTSB-205ENST00000505496 BAZ2BQ9UIF8 2168 aaKnown RBP10.05□□□□□ -0.8
CTSB-205ENST00000505496 hCG_1642624A0A1W2PR95 340 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 PRPF3O43395 683 aaKnown RBP10.05□□□□□ -0.8
CTSB-205ENST00000505496 PGK1P00558 417 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 NR3C2P08235 984 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 SMPD1P17405 629 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 HOXA13P31271 388 aaPredicted RBP10.05□□□□□ -0.8
CTSB-205ENST00000505496 ADCYAP1R1P41586 468 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 TNFAIP2Q03169 654 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 PDE4DQ08499 809 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 PFKFB3Q16875 520 aaPredicted RBP10.05□□□□□ -0.8
CTSB-205ENST00000505496 DUSP28Q4G0W2 176 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 ANO1Q5XXA6 986 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 WWC2Q6AWC2 1192 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 PPP1R18Q6NYC8 613 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 RNF180Q86T96 592 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 VSIG10LQ86VR7 867 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 PDCD2LQ9BRP1 358 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 TSEN34Q9BSV6 310 aaKnown RBP10.05□□□□□ -0.8
CTSB-205ENST00000505496 HTATIP2Q9BUP3 242 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 PDGFCQ9NRA1 345 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 BARHL2Q9NY43 387 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 RBM27Q9P2N5 1060 aaKnown RBP10.05□□□□□ -0.8
CTSB-205ENST00000505496 PHF24Q9UPV7 400 aa10.05□□□□□ -0.8
CTSB-205ENST00000505496 RANBP2P49792 3224 aaKnown RBP10.04□□□□□ -0.8
CTSB-205ENST00000505496 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 STXBP3O00186 592 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 EIF3JO75822 258 aaKnown RBP10.04□□□□□ -0.8
CTSB-205ENST00000505496 RGS20O76081 388 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 EIF2AK2P19525 551 aaKnown RBP10.04□□□□□ -0.8
CTSB-205ENST00000505496 RBM25P49756 843 aaKnown RBP10.04□□□□□ -0.8
CTSB-205ENST00000505496 SNX17Q15036 470 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 PGM5Q15124 567 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 ANKRD1Q15327 319 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 STXBP2Q15833 593 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 PKN1Q16512 942 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 GJC2Q5T442 439 aaPredicted RBP10.04□□□□□ -0.8
CTSB-205ENST00000505496 C1orf53Q5VUE5 145 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 ARHGEF16Q5VV41 709 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 CCDC62Q6P9F0 684 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 EEPD1Q7L9B9 569 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 SCFD2Q8WU76 684 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 KIF2CQ99661 725 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 RNF26Q9BY78 433 aaPredicted RBP10.04□□□□□ -0.8
CTSB-205ENST00000505496 WDR11Q9BZH6 1224 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 PSTPIP2Q9H939 334 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
CTSB-205ENST00000505496 TPCN1Q9ULQ1 816 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 LRRC37A2A6NM11 1700 aa10.04□□□□□ -0.8
CTSB-205ENST00000505496 ESYT2A0FGR8 921 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 MYADML2A6NDP7 307 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 KBTBD13C9JR72 458 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 NKRFO15226 690 aaKnown RBP eCLIP10.03□□□□□ -0.82e-7■■□□□ 14
CTSB-205ENST00000505496 PFKFB2O60825 505 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 SCG2P13521 617 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 AK2P54819 239 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 TMEM63BQ5T3F8 832 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 XRRA1Q6P2D8 792 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 USP17L6PQ6QN14 398 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 HEATR3Q7Z4Q2 680 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 TLK2Q86UE8 772 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 IL31RAQ8NI17 732 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 GPKOWQ92917 476 aaPredicted RBP eCLIP10.03□□□□□ -0.8
CTSB-205ENST00000505496 GLT8D2Q9H1C3 349 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 SPC25Q9HBM1 224 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 RIC8AQ9NPQ8 531 aa10.03□□□□□ -0.8
CTSB-205ENST00000505496 NAP1L2Q9ULW6 460 aaPredicted RBP10.03□□□□□ -0.8
CTSB-205ENST00000505496 CEP290O15078 2479 aa10.02□□□□□ -0.8
CTSB-205ENST00000505496 A0A1W2PQ45 241 aaPredicted RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 A0A1W2PQY0 241 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 STAM2O75886 525 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 ARIH2O95376 493 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 CLK2P49760 499 aaKnown RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 ACLYP53396 1101 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 CCT2P78371 535 aaKnown RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 IRX5P78411 483 aaPredicted RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 MRPS9P82933 396 aaKnown RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 SCRN1Q12765 414 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 TTLL4Q14679 1199 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 KCNA10Q16322 511 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 LRRC26Q2I0M4 334 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 FCHSD1Q86WN1 690 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 FAM177A1Q8N128 213 aaPredicted RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 PCSK9Q8NBP7 692 aaKnown RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 CUL5Q93034 780 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 PHKBQ93100 1093 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 EMID1Q96A84 441 aaPredicted RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 INPP4AQ96PE3 977 aaPredicted RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 LARP6Q9BRS8 491 aaKnown RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 SENP6Q9GZR1 1112 aaPredicted RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 ZMYND12Q9H0C1 365 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 DDX41Q9UJV9 622 aaKnown RBP10.02□□□□□ -0.81
CTSB-205ENST00000505496 GTF3C3Q9Y5Q9 886 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 FRMPD3Q5JV73 1810 aa10.02□□□□□ -0.81
CTSB-205ENST00000505496 ELP1O95163 1332 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms