RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 VSIG10LQ86VR7 867 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 FBXO16Q8IX29 292 aaPredicted RBP10.92□□□□□ -0.66
SIL1-206ENST00000505353 NSUN6Q8TEA1 469 aaKnown RBP10.92□□□□□ -0.66
SIL1-206ENST00000505353 PIBF1Q8WXW3 757 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 ZNF274Q96GC6 653 aaPredicted RBP10.92□□□□□ -0.66
SIL1-206ENST00000505353 RMDN3Q96TC7 470 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 PDCD2LQ9BRP1 358 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 C11orf49Q9H6J7 331 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 XPNPEP3Q9NQH7 507 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 PXMP2Q9NR77 195 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 ZHX1Q9UKY1 873 aaPredicted RBP10.92□□□□□ -0.66
SIL1-206ENST00000505353 PHF24Q9UPV7 400 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 Q9Y3F1 56 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 CYP46A1Q9Y6A2 500 aa10.92□□□□□ -0.66
SIL1-206ENST00000505353 V9GY48 417 aaPredicted RBP10.92□□□□□ -0.66
SIL1-206ENST00000505353 GOLGA8AA7E2F4 631 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 GOLGA8BA8MQT2 603 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 ARIH2O95376 493 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 NR3C2P08235 984 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 METAP2P50579 478 aaKnown RBP eCLIP10.91□□□□□ -0.66
SIL1-206ENST00000505353 TNFAIP2Q03169 654 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 LRRC26Q2I0M4 334 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 DUSP28Q4G0W2 176 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 C1orf53Q5VUE5 145 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 WWC2Q6AWC2 1192 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 IL31RAQ8NI17 732 aa10.91□□□□□ -0.66
SIL1-206ENST00000505353 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
SIL1-206ENST00000505353 TSEN34Q9BSV6 310 aaKnown RBP10.91□□□□□ -0.66
SIL1-206ENST00000505353 KIAA1217Q5T5P2 1943 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 GCOM1H8Y6P7 765 aaPredicted RBP10.9□□□□□ -0.66
SIL1-206ENST00000505353 ADAMTS3O15072 1205 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 POLR2MP0CAP2 368 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 IFNAR1P17181 557 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 MRPS9P82933 396 aaKnown RBP10.9□□□□□ -0.66
SIL1-206ENST00000505353 PGM5Q15124 567 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 KCNA10Q16322 511 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 USP17L6PQ6QN14 398 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 SLC39A5Q6ZMH5 540 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 WDR11Q9BZH6 1224 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 SENP6Q9GZR1 1112 aaPredicted RBP10.9□□□□□ -0.66
SIL1-206ENST00000505353 NCOA5Q9HCD5 579 aaKnown RBP10.9□□□□□ -0.66
SIL1-206ENST00000505353 PDRG1Q9NUG6 133 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 TPCN1Q9ULQ1 816 aa10.9□□□□□ -0.66
SIL1-206ENST00000505353 CCDC196A0A1B0GTZ2 297 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 STXBP3O00186 592 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 PRPF3O43395 683 aaKnown RBP10.89□□□□□ -0.67
SIL1-206ENST00000505353 EIF3JO75822 258 aaKnown RBP10.89□□□□□ -0.67
SIL1-206ENST00000505353 EIF2AK2P19525 551 aaKnown RBP10.89□□□□□ -0.67
SIL1-206ENST00000505353 CLK2P49760 499 aaKnown RBP10.89□□□□□ -0.67
SIL1-206ENST00000505353 ACLYP53396 1101 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 CCT2P78371 535 aaKnown RBP10.89□□□□□ -0.67
SIL1-206ENST00000505353 STXBP2Q15833 593 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 PFKFB3Q16875 520 aaPredicted RBP10.89□□□□□ -0.67
SIL1-206ENST00000505353 RNF180Q86T96 592 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 TEX2Q8IWB9 1127 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
SIL1-206ENST00000505353 HTATIP2Q9BUP3 242 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 PRO3102Q9H379 93 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 PSTPIP2Q9H939 334 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 BARHL2Q9NY43 387 aa10.89□□□□□ -0.67
SIL1-206ENST00000505353 SEC63Q9UGP8 760 aaKnown RBP10.89□□□□□ -0.67
SIL1-206ENST00000505353 DDX41Q9UJV9 622 aaKnown RBP10.89□□□□□ -0.67
SIL1-206ENST00000505353 RANBP2P49792 3224 aaKnown RBP10.89□□□□□ -0.67
SIL1-206ENST00000505353 GRIN2DO15399 1336 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 A0A1W2PQ45 241 aaPredicted RBP10.88□□□□□ -0.67
SIL1-206ENST00000505353 A0A1W2PQY0 241 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 MOXD2PA6NHM9 499 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 H0YGN5 161 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 DYNC1LI2O43237 492 aaPredicted RBP10.88□□□□□ -0.67
SIL1-206ENST00000505353 EDIL3O43854 480 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 EIF5BO60841 1220 aaKnown RBP10.88□□□□□ -0.67
SIL1-206ENST00000505353 CTDNEP1O95476 244 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 ASGR1P07306 291 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
SIL1-206ENST00000505353 CDK7P50613 346 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 AK2P54819 239 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 FGD1P98174 961 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 SP2Q02086 613 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 PDE4DQ08499 809 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 SCRN1Q12765 414 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 SEMA3FQ13275 785 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 PRPF38BQ5VTL8 546 aaKnown RBP10.88□□□□□ -0.67
SIL1-206ENST00000505353 ARHGEF16Q5VV41 709 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 TLK2Q86UE8 772 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 SLC43A3Q8NBI5 491 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 SCFD2Q8WU76 684 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 CRYGNQ8WXF5 182 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 COPS5Q92905 334 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 INPP4AQ96PE3 977 aaPredicted RBP10.88□□□□□ -0.67
SIL1-206ENST00000505353 RNF26Q9BY78 433 aaPredicted RBP10.88□□□□□ -0.67
SIL1-206ENST00000505353 RIC8AQ9NPQ8 531 aa10.88□□□□□ -0.67
SIL1-206ENST00000505353 ESYT2A0FGR8 921 aa10.87□□□□□ -0.67
SIL1-206ENST00000505353 A6NJR5 290 aa10.87□□□□□ -0.67
SIL1-206ENST00000505353 B4DLN1 442 aa10.87□□□□□ -0.67
SIL1-206ENST00000505353 KBTBD13C9JR72 458 aa10.87□□□□□ -0.67
SIL1-206ENST00000505353 hCG_1984214I3L0E3 225 aa10.87□□□□□ -0.67
SIL1-206ENST00000505353 NKRFO15226 690 aaKnown RBP eCLIP10.87□□□□□ -0.67
SIL1-206ENST00000505353 PFKFB2O60825 505 aa10.87□□□□□ -0.67
SIL1-206ENST00000505353 LARGE1O95461 756 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms