RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 CCDC194A0A1B0GVG4 234 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 PEX10O60683 326 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 FKTNO75072 461 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 ZSCAN22P10073 491 aaPredicted RBP11.73□□□□□ -0.53
RFC1-210ENST00000505077 TAL1P17542 331 aaPredicted RBP11.73□□□□□ -0.53
RFC1-210ENST00000505077 TRAPPC10P48553 1259 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 XRRA1Q6P2D8 792 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 USP17L6PQ6QN14 398 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 SLC30A10Q6XR72 485 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
RFC1-210ENST00000505077 NOSTRINQ8IVI9 506 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 RPTORQ8N122 1335 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 FAM133AQ8N9E0 248 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 SYTL5Q8TDW5 730 aaPredicted RBP11.73□□□□□ -0.53
RFC1-210ENST00000505077 NSUN6Q8TEA1 469 aaKnown RBP11.73□□□□□ -0.53
RFC1-210ENST00000505077 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 GJB4Q9NTQ9 266 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 DIS3Q9Y2L1 958 aaKnown RBP11.73□□□□□ -0.53
RFC1-210ENST00000505077 ATP6V1DQ9Y5K8 247 aa11.73□□□□□ -0.53
RFC1-210ENST00000505077 BTBD18B2RXH4 712 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 POTEB2H3BUK9 544 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 DTNBO60941 627 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 BRD1O95696 1058 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 HOXC6P09630 235 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 HOXD10P28358 340 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 ADORA2AP29274 412 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 HOXA13P31271 388 aaPredicted RBP11.72□□□□□ -0.53
RFC1-210ENST00000505077 SREBF1P36956 1147 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 RGS2P41220 211 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 FOSBP53539 338 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 PRMT2P55345 433 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 GUCY1B3Q02153 619 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 ORC2Q13416 577 aaPredicted RBP11.72□□□□□ -0.53
RFC1-210ENST00000505077 BAATQ14032 418 aaPredicted RBP11.72□□□□□ -0.53
RFC1-210ENST00000505077 NONOQ15233 471 aaKnown RBP eCLIP11.72□□□□□ -0.53
RFC1-210ENST00000505077 MORN1Q5T089 497 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 MSL3Q8N5Y2 521 aaKnown RBP11.72□□□□□ -0.53
RFC1-210ENST00000505077 IWS1Q96ST2 819 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 NAP1L4Q99733 375 aaKnown RBP11.72□□□□□ -0.53
RFC1-210ENST00000505077 APBA2Q99767 749 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 ANO3Q9BYT9 981 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 NOL7Q9UMY1 257 aaKnown RBP11.72□□□□□ -0.53
RFC1-210ENST00000505077 PCDHA6Q9UN73 950 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 PCDHA8Q9Y5H6 950 aa11.72□□□□□ -0.53
RFC1-210ENST00000505077 HTTP42858 3142 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 STAM2O75886 525 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 XRCC5P13010 732 aaKnown RBP11.71□□□□□ -0.53
RFC1-210ENST00000505077 PSMC4P43686 418 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 MAP2K5Q13163 448 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 IRF5Q13568 498 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 UBE2SQ16763 222 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 RILPL1Q5EBL4 403 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 MOXD1Q6UVY6 613 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.53
RFC1-210ENST00000505077 ZNF296Q8WUU4 475 aaPredicted RBP11.71□□□□□ -0.53
RFC1-210ENST00000505077 CRYGNQ8WXF5 182 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 USP6NLQ92738 828 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 TRIM47Q96LD4 638 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 RMDN3Q96TC7 470 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 PXMP2Q9NR77 195 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 CHMP5Q9NZZ3 219 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 COL20A1Q9P218 1284 aa11.71□□□□□ -0.53
RFC1-210ENST00000505077 BIN2Q9UBW5 565 aaPredicted RBP11.71□□□□□ -0.53
RFC1-210ENST00000505077 SYNGAP1Q96PV0 1343 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 ASB14A6NK59 587 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 F13A1P00488 732 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 GCFC2P16383 781 aaKnown RBP11.7□□□□□ -0.54
RFC1-210ENST00000505077 USP11P51784 963 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 RESTQ13127 1097 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 NR5A1Q13285 461 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 ZNF792Q3KQV3 632 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 ARHGEF16Q5VV41 709 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 JAKMIP3Q5VZ66 844 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 PCNX4Q63HM2 1172 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 DPP9Q86TI2 863 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 FCHSD1Q86WN1 690 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 OXER1Q8TDS5 423 aa11.7□□□□□ -0.54
RFC1-210ENST00000505077 KIF28PB7ZC32 967 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 CYP3A4P08684 503 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 EDNRBP24530 442 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 CCND2P30279 289 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 ALDH5A1P51649 535 aaPredicted RBP11.69□□□□□ -0.54
RFC1-210ENST00000505077 ARHGAP4P98171 946 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 SETQ01105 290 aaPredicted RBP11.69□□□□□ -0.54
RFC1-210ENST00000505077 PGM5Q15124 567 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 MAMDC4Q6UXC1 1216 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 PIK3AP1Q6ZUJ8 805 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 NEK8Q86SG6 692 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 RASGRP4Q8TDF6 673 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 MORC4Q8TE76 937 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 TBC1D5Q92609 795 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 PDCD2LQ9BRP1 358 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
RFC1-210ENST00000505077 SRRDQ9UH36 339 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms