RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TNFRSF12AQ9NP84 129 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 FANCLQ9NW38 375 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 ZMYM5Q9UJ78 669 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 PLA2G2DQ9UNK4 145 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 TSC22D4Q9Y3Q8 395 aa5.37□□□□□ -1.55
RFC1-208ENST00000504849 AQRO60306 1485 aaKnown RBP eCLIP5.37□□□□□ -1.554e-9■□□□□ 9.9
RFC1-208ENST00000504849 GBP2P32456 591 aaPredicted RBP5.36□□□□□ -1.55
RFC1-208ENST00000504849 AMPD3Q01432 767 aa5.36□□□□□ -1.55
RFC1-208ENST00000504849 CCDC85BQ15834 202 aaPredicted RBP5.36□□□□□ -1.55
RFC1-208ENST00000504849 PLEKHN1Q494U1 663 aaPredicted RBP5.36□□□□□ -1.55
RFC1-208ENST00000504849 RNF111Q6ZNA4 994 aa5.36□□□□□ -1.55
RFC1-208ENST00000504849 CCAR1Q8IX12 1150 aaKnown RBP5.36□□□□□ -1.55
RFC1-208ENST00000504849 ZNF296Q8WUU4 475 aaPredicted RBP5.36□□□□□ -1.55
RFC1-208ENST00000504849 HNRNPLLQ8WVV9 542 aaKnown RBP5.36□□□□□ -1.55
RFC1-208ENST00000504849 ST6GALNAC2Q9UJ37 374 aa5.36□□□□□ -1.55
RFC1-208ENST00000504849 MRVI1Q9Y6F6 885 aa5.36□□□□□ -1.55
RFC1-208ENST00000504849 PHLDB1Q86UU1 1377 aa5.36□□□□□ -1.55
RFC1-208ENST00000504849 CFTRP13569 1480 aa5.36□□□□□ -1.55
RFC1-208ENST00000504849 CCDC18Q5T9S5 1454 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 CASKIN1Q8WXD9 1431 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 UACAQ9BZF9 1416 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 CARMIL1Q5VZK9 1371 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 FAM221BA6H8Z2 402 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 PLATP00750 562 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 PGRP06401 933 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 PDGFRBP09619 1106 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 CEBPAP49715 358 aaPredicted RBP5.35□□□□□ -1.55
RFC1-208ENST00000504849 RTP1P59025 263 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 ZNF200P98182 395 aaPredicted RBP5.35□□□□□ -1.55
RFC1-208ENST00000504849 IFRD2Q12894 506 aaPredicted RBP5.35□□□□□ -1.55
RFC1-208ENST00000504849 ZPBP2Q6X784 338 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 SV2BQ7L1I2 683 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 EXOC8Q8IYI6 725 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 CARFQ8N187 725 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 MORC4Q8TE76 937 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 STAG1Q8WVM7 1258 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 CCDC136Q96JN2 1154 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 RHOVQ96L33 236 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 SIN3AQ96ST3 1273 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 FEZ1Q99689 392 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 SRRTQ9BXP5 876 aaKnown RBP5.35□□□□□ -1.55
RFC1-208ENST00000504849 VPS11Q9H270 941 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 GEMIN8Q9NWZ8 242 aaKnown RBP5.35□□□□□ -1.55
RFC1-208ENST00000504849 TMEM260Q9NX78 707 aa5.35□□□□□ -1.55
RFC1-208ENST00000504849 FGD5Q6ZNL6 1462 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 HFM1A2PYH4 1435 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 FMN1Q68DA7 1419 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 ROBO2Q9HCK4 1378 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 LTBP3Q9NS15 1303 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 MINDY4BA8MYZ0 360 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 GREM1O60565 184 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 VIL1P09327 827 aaKnown RBP5.34□□□□□ -1.55
RFC1-208ENST00000504849 ATF2P15336 505 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 GYS2P54840 703 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 TMEM62Q0P6H9 643 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 RASGRF1Q13972 1273 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 HSF5Q4G112 596 aaPredicted RBP5.34□□□□□ -1.55
RFC1-208ENST00000504849 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.34□□□□□ -1.55
RFC1-208ENST00000504849 C16orf86Q6ZW13 317 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 USP51Q70EK9 711 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 SYNPOQ8N3V7 929 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 CYB5D2Q8WUJ1 264 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 FOXP3Q9BZS1 431 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 C11orf21Q9P2W6 132 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 PMF1-BGLAPU3KQ54 211 aa5.34□□□□□ -1.55
RFC1-208ENST00000504849 PCF11O94913 1555 aaKnown RBP5.33□□□□□ -1.56
RFC1-208ENST00000504849 FGD6Q6ZV73 1430 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 FADS2P1A8MWK0 482 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 EIF3JO75822 258 aaKnown RBP5.33□□□□□ -1.56
RFC1-208ENST00000504849 MAP4K4O95819 1239 aaPredicted RBP5.33□□□□□ -1.56
RFC1-208ENST00000504849 PFKLP17858 780 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 GJA9P57773 515 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 FOXO4P98177 505 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 FBXL19Q6PCT2 694 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 SLITRK4Q8IW52 837 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 SMC5Q8IY18 1101 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 LILRB2Q8N423 598 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 PRPF38AQ8NAV1 312 aaKnown RBP5.33□□□□□ -1.56
RFC1-208ENST00000504849 ANAPC16Q96DE5 110 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 SHDQ96IW2 340 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 DNAJC7Q99615 494 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 HDAC8Q9BY41 377 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 HS3ST3A1Q9Y663 406 aa5.33□□□□□ -1.56
RFC1-208ENST00000504849 ADGRL1O94910 1474 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 CNTLNQ9NXG0 1405 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 ESYT3A0FGR9 886 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 PDPK1O15530 556 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 GARTP22102 1010 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 ANP32AP39687 249 aaKnown RBP5.32□□□□□ -1.56
RFC1-208ENST00000504849 MASP1P48740 699 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 LMNB2Q03252 620 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 APOBRQ0VD83 1088 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 LAPTM5Q13571 262 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 DDR2Q16832 855 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 BBS9Q3SYG4 887 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 PHC3Q8NDX5 983 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 OR6P1Q8NGX9 317 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 NKD1Q969G9 470 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 CEP89Q96ST8 783 aa5.32□□□□□ -1.56
RFC1-208ENST00000504849 G3BP2Q9UN86 482 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms