RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 MTIF3Q9H2K0 278 aaKnown RBP15.43■□□□□ 0.06
DDX41-204ENST00000504807 CERS4Q9HA82 394 aa15.43■□□□□ 0.06
DDX41-204ENST00000504807 SENP2Q9HC62 589 aa15.43■□□□□ 0.06
DDX41-204ENST00000504807 PRRC2BQ5JSZ5 2229 aaKnown RBP15.43■□□□□ 0.06
DDX41-204ENST00000504807 TNKSO95271 1327 aa15.43■□□□□ 0.06
DDX41-204ENST00000504807 PCP11498 1178 aaKnown RBP15.42■□□□□ 0.06
DDX41-204ENST00000504807 CHMLP26374 656 aa15.42■□□□□ 0.06
DDX41-204ENST00000504807 ALDH5A1P51649 535 aaPredicted RBP15.42■□□□□ 0.06
DDX41-204ENST00000504807 MFAP1P55081 439 aaKnown RBP15.42■□□□□ 0.06
DDX41-204ENST00000504807 DGKHQ86XP1 1220 aa15.42■□□□□ 0.06
DDX41-204ENST00000504807 PNMA1Q8ND90 353 aa15.42■□□□□ 0.06
DDX41-204ENST00000504807 ZSCAN10Q96SZ4 725 aaPredicted RBP15.42■□□□□ 0.06
DDX41-204ENST00000504807 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
DDX41-204ENST00000504807 IL23AQ9NPF7 189 aa15.42■□□□□ 0.06
DDX41-204ENST00000504807 MOXD2PA6NHM9 499 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 FGBP02675 491 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 CYP2C18P33260 490 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 TNFAIP2Q03169 654 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 SEC23AQ15436 765 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 CSPP1Q1MSJ5 1256 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 CXCL17Q6UXB2 119 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 STOX1Q6ZVD7 989 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 TLK2Q86UE8 772 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 STAG2Q8N3U4 1231 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 COL20A1Q9P218 1284 aa15.41■□□□□ 0.06
DDX41-204ENST00000504807 PTPDC1A2A3K4 754 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 ASB14A6NK59 587 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 HIP1O00291 1037 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 CYP21A2P08686 494 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 CALML3P27482 149 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 RPS6P62753 249 aaKnown RBP15.4■□□□□ 0.06
DDX41-204ENST00000504807 USH1GQ495M9 461 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 GNASQ5JWF2 1037 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 ADGRF4Q8IZF3 695 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 PPP1R13LQ8WUF5 828 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 VTI1AQ96AJ9 217 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 MROH7Q68CQ1 1323 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
DDX41-204ENST00000504807 EPOPA6NHQ4 379 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 OPLAHO14841 1288 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 DYNC1LI2O43237 492 aaPredicted RBP15.39■□□□□ 0.05
DDX41-204ENST00000504807 PPP1R11O60927 126 aaPredicted RBP15.39■□□□□ 0.05
DDX41-204ENST00000504807 ARIH2O95376 493 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 EDNRBP24530 442 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 PSMC6P62333 389 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 CDC37Q16543 378 aaPredicted RBP15.39■□□□□ 0.05
DDX41-204ENST00000504807 IMMTQ16891 758 aaKnown RBP15.39■□□□□ 0.05
DDX41-204ENST00000504807 FAM126BQ8IXS8 530 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 COPS5Q92905 334 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 JMJD4Q9H9V9 463 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 PCDHA11Q9Y5I1 949 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 UMODL1Q5DID0 1318 aa15.39■□□□□ 0.05
DDX41-204ENST00000504807 QRICH1Q2TAL8 776 aa15.38■□□□□ 0.05
DDX41-204ENST00000504807 RNF207Q6ZRF8 634 aa15.38■□□□□ 0.05
DDX41-204ENST00000504807 SLC43A3Q8NBI5 491 aa15.38■□□□□ 0.05
DDX41-204ENST00000504807 GLT1D1Q96MS3 346 aa15.38■□□□□ 0.05
DDX41-204ENST00000504807 KAT14Q9H8E8 782 aa15.38■□□□□ 0.05
DDX41-204ENST00000504807 SLC4A7Q9Y6M7 1214 aa15.38■□□□□ 0.05
DDX41-204ENST00000504807 ELP1O95163 1332 aa15.38■□□□□ 0.05
DDX41-204ENST00000504807 RBM47A0AV96 593 aaKnown RBP15.37■□□□□ 0.05
DDX41-204ENST00000504807 ZBBXA8MT70 800 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 ARVCFO00192 962 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 SGSM2O43147 1006 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 CD4P01730 458 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 CA3P07451 260 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 POU3F3P20264 500 aaPredicted RBP15.37■□□□□ 0.05
DDX41-204ENST00000504807 SSTR3P32745 418 aaPredicted RBP15.37■□□□□ 0.05
DDX41-204ENST00000504807 ANTXR2P58335 489 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 FSCN1Q16658 493 aaKnown RBP15.37■□□□□ 0.05
DDX41-204ENST00000504807 GPATCH4Q5T3I0 446 aaKnown RBP15.37■□□□□ 0.05
DDX41-204ENST00000504807 KIAA1211Q6ZU35 1233 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 NOL8Q76FK4 1167 aaKnown RBP15.37■□□□□ 0.05
DDX41-204ENST00000504807 CHST3Q7LGC8 479 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 GJD3Q8N144 294 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 PCSK9Q8NBP7 692 aaKnown RBP15.37■□□□□ 0.05
DDX41-204ENST00000504807 VWCEQ96DN2 955 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 PHOX2BQ99453 314 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 VTA1Q9NP79 307 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 GPHNQ9NQX3 736 aaPredicted RBP15.37■□□□□ 0.05
DDX41-204ENST00000504807 RAD50Q92878 1312 aa15.37■□□□□ 0.05
DDX41-204ENST00000504807 A0A0U1RQG5 324 aaPredicted RBP15.36■□□□□ 0.05
DDX41-204ENST00000504807 ATP2A2P16615 1042 aaKnown RBP15.36■□□□□ 0.05
DDX41-204ENST00000504807 DUSP28Q4G0W2 176 aa15.36■□□□□ 0.05
DDX41-204ENST00000504807 IQSEC1Q6DN90 963 aa15.36■□□□□ 0.05
DDX41-204ENST00000504807 IQCA1Q86XH1 822 aa15.36■□□□□ 0.05
DDX41-204ENST00000504807 ARNTL2Q8WYA1 636 aa15.36■□□□□ 0.05
DDX41-204ENST00000504807 TAAR1Q96RJ0 339 aa15.36■□□□□ 0.05
DDX41-204ENST00000504807 VAT1LQ9HCJ6 419 aa15.36■□□□□ 0.05
DDX41-204ENST00000504807 CTNNA3Q9UI47 895 aa15.36■□□□□ 0.05
DDX41-204ENST00000504807 MAD2L2Q9UI95 211 aa15.36■□□□□ 0.05
DDX41-204ENST00000504807 USP34Q70CQ2 3546 aa15.35■□□□□ 0.05
DDX41-204ENST00000504807 TLR3O15455 904 aaKnown RBP15.35■□□□□ 0.05
DDX41-204ENST00000504807 CCL23P55773 120 aa15.35■□□□□ 0.05
DDX41-204ENST00000504807 SYTL5Q8TDW5 730 aaPredicted RBP15.35■□□□□ 0.05
DDX41-204ENST00000504807 WDR11Q9BZH6 1224 aa15.35■□□□□ 0.05
DDX41-204ENST00000504807 KRT23Q9C075 422 aa15.35■□□□□ 0.05
DDX41-204ENST00000504807 TRPV6Q9H1D0 765 aa15.35■□□□□ 0.05
DDX41-204ENST00000504807 CFAP54Q96N23 3096 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 GBF1Q92538 1859 aa15.34■□□□□ 0.05
DDX41-204ENST00000504807 E7EWF7 191 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms