RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH11X-208	ENST00000504220	NDUFB9	Q9Y6M9	179 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	MYH1	P12882	1939 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	FAM25E	A8MYX2	175 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TADA3	O75528	432 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CCDC175	P0C221	793 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TRIM21	P19474	475 aa	Known RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	POU5F1	Q01860	360 aa	Known RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TMED1	Q13445	227 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ARID5B	Q14865	1188 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SEPT12	Q8IYM1	358 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	C7orf57	Q8NEG2	295 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TBC1D20	Q96BZ9	403 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	HVCN1	Q96D96	273 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ERP27	Q96DN0	273 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	L3MBTL3	Q96JM7	780 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	UROC1	Q96N76	676 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	UIMC1	Q96RL1	719 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GUCA1B	Q9UMX6	200 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	MRC1	P22897	1456 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SLU7	O95391	586 aa	Known RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	YEATS4	O95619	227 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CYP1A1	P04798	512 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SETSIP	P0DME0	302 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	COL6A2	P12110	1019 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	UBA7	P41226	1012 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	LIG3	P49916	1009 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	EMP3	P54852	163 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	BYSL	Q13895	437 aa	Known RBP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	RASA2	Q15283	850 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GNPTAB	Q3T906	1256 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TMEM67	Q5HYA8	995 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	LDHAL6A	Q6ZMR3	332 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	LSMEM2	Q8N112	164 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	DCLK2	Q8N568	766 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PSMB7	Q99436	277 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	HAUS7	Q99871	368 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ESYT1	Q9BSJ8	1104 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	NDFIP2	Q9NV92	336 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	STX8	Q9UNK0	236 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220	NOX1	Q9Y5S8	564 aa		4.06	□□□□□ -1.76
PCDH11X-208	ENST00000504220		H7C1D1	291 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CHUK	O15111	745 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ZNF254	O75437	659 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	F13A1	P00488	732 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	FGA	P02671	866 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	BLMH	Q13867	455 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	KRT72	Q14CN4	511 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	KIAA0753	Q2KHM9	967 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ZSCAN25	Q6NSZ9	544 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GBP6	Q6ZN66	633 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220		Q6ZUG5	572 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ARMC9	Q7Z3E5	817 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	DEPTOR	Q8TB45	409 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SAAL1	Q96ER3	474 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	VPS50	Q96JG6	964 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SPOCK3	Q9BQ16	436 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CLK4	Q9HAZ1	481 aa	Known RBP	4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CCPG1	Q9ULG6	757 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	USP20	Q9Y2K6	914 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	KIF13B	Q9NQT8	1826 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	UBR3	Q6ZT12	1888 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	BICDL2	A1A5D9	508 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	AGPS	O00116	658 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	USO1	O60763	962 aa	Known RBP	4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	NAGA	P17050	411 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	MZF1	P28698	734 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	NF2	P35240	595 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GCK	P35557	465 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	GSDMD	P57764	484 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	APOBR	Q0VD83	1088 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ME3	Q16798	604 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CCDC40	Q4G0X9	1142 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ZNF569	Q5MCW4	686 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	RRAGB	Q5VZM2	374 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	OR52E8	Q6IFG1	317 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	OLFML1	Q6UWY5	402 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	UNC5D	Q6UXZ4	953 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	SPATS2	Q86XZ4	545 aa	Known RBP	4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PEX5L	Q8IYB4	626 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	IFT81	Q8WYA0	676 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CENPT	Q96BT3	561 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	DHX58	Q96C10	678 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TRIM47	Q96LD4	638 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	CHST12	Q9NRB3	414 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	HYPK	Q9NX55	129 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	JAG2	Q9Y219	1238 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	MYH2	Q9UKX2	1941 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	TJP1	Q07157	1748 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	MEGF6	O75095	1541 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	HTR3E	A5X5Y0	456 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	KCNQ3	O43525	872 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	APBA3	O96018	575 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	MYBL1	P10243	752 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	ALAD	P13716	330 aa		4.05	□□□□□ -1.76
PCDH11X-208	ENST00000504220	RPL17	P18621	184 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms