RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 FUCA2Q9BTY2 467 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 ACBD3Q9H3P7 528 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 DNAJC18Q9H819 358 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 GPCPD1Q9NPB8 672 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 HDAC6Q9UBN7 1215 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 HERC5Q9UII4 1024 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 RBM8AQ9Y5S9 174 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 MYH8P13535 1937 aa10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 GREB1LQ9C091 1923 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-207ENST00000503974 CYP2D7A0A087X1C5 515 aa10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 POLR3DP05423 398 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 FGRP09769 529 aa10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 FSTL1Q12841 308 aa10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 DHX8Q14562 1220 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 KBTBD12Q3ZCT8 623 aa10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 SUPT20HL1Q3ZLR7 823 aa10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 DLK2Q6UY11 383 aa10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 FOXP4Q8IVH2 680 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 ZNF510Q9Y2H8 683 aa10.71□□□□□ -0.69
PDLIM5-207ENST00000503974 USP27XA6NNY8 438 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 GOLGA6L19H0YKK7 550 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 SMIM22K7EJ46 135 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 TRAF5O00463 557 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 FSBPO95073 299 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 CAVIN2O95810 425 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 PAPOLAP51003 745 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 MAP3K11Q16584 847 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 PRAMEF18Q5VWM3 479 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 CAPRIN2Q6IMN6 1127 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 MIS18BP1Q6P0N0 1132 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 C16orf86Q6ZW13 317 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 TMC6Q7Z403 805 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 ZFAND2BQ8WV99 257 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 AGBL1Q96MI9 1066 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 USP26Q9BXU7 913 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 PLEKHA4Q9H4M7 779 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 ARFGAP3Q9NP61 516 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 SERPINB13Q9UIV8 391 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 CAPN7Q9Y6W3 813 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 DOCK1Q14185 1865 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 MARCH6O60337 910 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 CYP21A2P08686 494 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 HSPA4P34932 840 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 INHBCP55103 352 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 APOBRQ0VD83 1088 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 PABPC4Q13310 644 aaKnown RBP eCLIP10.7□□□□□ -0.73e-8■□□□□ 9.8
PDLIM5-207ENST00000503974 Q4G0T1 1027 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 DCAF15Q66K64 600 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 TATDN1Q6P1N9 297 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 ZSCAN29Q8IWY8 852 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 PIAS4Q8N2W9 510 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 CUL5Q93034 780 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 BHMTQ93088 406 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 GORASP1Q9BQQ3 440 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 RABL2AQ9UBK7 228 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 SWAP70Q9UH65 585 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 PNMA2Q9UL42 364 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 N6AMT1Q9Y5N5 214 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 ATAD5Q96QE3 1844 aa10.7□□□□□ -0.7
PDLIM5-207ENST00000503974 ERICH2A1L162 156 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 PCP11498 1178 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 FERP16591 822 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 ABL2P42684 1182 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 NT5C2P49902 561 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 FKBP1BP68106 108 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 IMMTQ16891 758 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 CACTINQ8WUQ7 758 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 CCDC102AQ96A19 550 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 CHAMP1Q96JM3 812 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 INCENPQ9NQS7 918 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 KLC4Q9NSK0 619 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 WDR37Q9Y2I8 494 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 TACC3Q9Y6A5 838 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 ATXN2Q99700 1313 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 MINDY4BA8MYZ0 360 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 MYO1FO00160 1098 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 ZNF213O14771 459 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 MMEP08473 750 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 EZRP15311 586 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 SHMT1P34896 483 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 CA8P35219 290 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 FMR1Q06787 632 aaKnown RBP eCLIP10.69□□□□□ -0.73e-9■■■■■ 33
PDLIM5-207ENST00000503974 MYBPC3Q14896 1274 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 CREB3L3Q68CJ9 461 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 TBC1D10CQ8IV04 446 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 SMYD1Q8NB12 490 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 CNNM3Q8NE01 707 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 TRIM11Q96F44 468 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 IL17RAQ96F46 866 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 DYNLL2Q96FJ2 89 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 CLIC6Q96NY7 704 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 SLC39A2Q9NP94 309 aa10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 CTDP1Q9Y5B0 961 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-207ENST00000503974 TMEM221A6NGB7 291 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 PHF20L1A8MW92 1017 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 ORC4O43929 436 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 NEMFO60524 1076 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms