RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 MTMR10Q9NXD2 777 aa21.23■□□□□ 0.99
RNF4-204ENST00000503659 PCDHA1Q9Y5I3 950 aa21.23■□□□□ 0.99
RNF4-204ENST00000503659 LAMA2P24043 3122 aaKnown RBP21.22■□□□□ 0.99
RNF4-204ENST00000503659 CABYRO75952 493 aa21.22■□□□□ 0.99
RNF4-204ENST00000503659 CFBP00751 764 aa21.22■□□□□ 0.99
RNF4-204ENST00000503659 SHHQ15465 462 aa21.22■□□□□ 0.99
RNF4-204ENST00000503659 RMDN3Q96TC7 470 aa21.22■□□□□ 0.99
RNF4-204ENST00000503659 SEZ6LQ9BYH1 1024 aa21.22■□□□□ 0.99
RNF4-204ENST00000503659 ARVCFO00192 962 aa21.21■□□□□ 0.99
RNF4-204ENST00000503659 Q7L0L9 218 aa21.21■□□□□ 0.99
RNF4-204ENST00000503659 NSUN6Q8TEA1 469 aaKnown RBP21.21■□□□□ 0.99
RNF4-204ENST00000503659 SCFD2Q8WU76 684 aa21.21■□□□□ 0.99
RNF4-204ENST00000503659 VTI1AQ96AJ9 217 aa21.21■□□□□ 0.99
RNF4-204ENST00000503659 LRRC2Q9BYS8 371 aa21.21■□□□□ 0.99
RNF4-204ENST00000503659 STXBP5LQ9Y2K9 1186 aa21.21■□□□□ 0.99
RNF4-204ENST00000503659 GRIN2DO15399 1336 aa21.21■□□□□ 0.99
RNF4-204ENST00000503659 SCN10AQ9Y5Y9 1956 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 PNMA6FA0A0J9YX94 578 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 B4DLN1 442 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 ZEB2O60315 1214 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 ARIH2O95376 493 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 LIFRP42702 1097 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 MRPL12P52815 198 aaKnown RBP21.2■□□□□ 0.98
RNF4-204ENST00000503659 PPP2R5BQ15173 497 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 C9orf50Q5SZB4 431 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 RNF20Q5VTR2 975 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 FAM126BQ8IXS8 530 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 SLC43A3Q8NBI5 491 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 CTCFLQ8NI51 663 aaPredicted RBP21.2■□□□□ 0.98
RNF4-204ENST00000503659 COPS5Q92905 334 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 SPZ1Q9BXG8 430 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 PXMP2Q9NR77 195 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 TBX21Q9UL17 535 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 COL6A3P12111 3177 aa21.2■□□□□ 0.98
RNF4-204ENST00000503659 TIMP1P01033 207 aa21.19■□□□□ 0.98
RNF4-204ENST00000503659 EIF2AK2P19525 551 aaKnown RBP21.19■□□□□ 0.98
RNF4-204ENST00000503659 FPGSQ05932 587 aa21.19■□□□□ 0.98
RNF4-204ENST00000503659 CCDC62Q6P9F0 684 aa21.19■□□□□ 0.98
RNF4-204ENST00000503659 NFXL1Q6ZNB6 911 aa21.19■□□□□ 0.98
RNF4-204ENST00000503659 RASEFQ8IZ41 740 aa21.19■□□□□ 0.98
RNF4-204ENST00000503659 TMTC2Q8N394 836 aa21.19■□□□□ 0.98
RNF4-204ENST00000503659 OR6J1Q8NGC5 347 aa21.19■□□□□ 0.98
RNF4-204ENST00000503659 IWS1Q96ST2 819 aa21.19■□□□□ 0.98
RNF4-204ENST00000503659 CCDC69A6NI79 296 aa21.18■□□□□ 0.98
RNF4-204ENST00000503659 NKRFO15226 690 aaKnown RBP eCLIP21.18■□□□□ 0.98
RNF4-204ENST00000503659 TLR3O15455 904 aaKnown RBP21.18■□□□□ 0.98
RNF4-204ENST00000503659 PLEKHA8P1O95397 391 aa21.18■□□□□ 0.98
RNF4-204ENST00000503659 TXNP10599 105 aaKnown RBP21.18■□□□□ 0.98
RNF4-204ENST00000503659 RXRAP19793 462 aa21.18■□□□□ 0.98
RNF4-204ENST00000503659 HOXA13P31271 388 aaPredicted RBP21.18■□□□□ 0.98
RNF4-204ENST00000503659 KIF5BP33176 963 aa21.18■□□□□ 0.98
RNF4-204ENST00000503659 SMAD3P84022 425 aaKnown RBP21.18■□□□□ 0.98
RNF4-204ENST00000503659 TSGA10IPQ3SY00 556 aa21.18■□□□□ 0.98
RNF4-204ENST00000503659 ARHGEF16Q5VV41 709 aa21.18■□□□□ 0.98
RNF4-204ENST00000503659 PIBF1Q8WXW3 757 aa21.18■□□□□ 0.98
RNF4-204ENST00000503659 MAP3K20Q9NYL2 800 aaKnown RBP21.18■□□□□ 0.98
RNF4-204ENST00000503659 CD4P01730 458 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 NEFLP07196 543 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 CPT1AP50416 773 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 PSMC6P62333 389 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 TRAF1Q13077 416 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 ITGA7Q13683 1181 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 TTLL4Q14679 1199 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 STXBP2Q15833 593 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 ADCK5Q3MIX3 580 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 ZNF697Q5TEC3 545 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 MFSD5Q6N075 450 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 SGMS1Q86VZ5 419 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 RAB11FIP4Q86YS3 637 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 SRBD1Q8N5C6 995 aaKnown RBP21.17■□□□□ 0.98
RNF4-204ENST00000503659 SAMD3Q8N6K7 520 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 NEK1Q96PY6 1258 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 MYH7BA7E2Y1 1941 aa21.17■□□□□ 0.98
RNF4-204ENST00000503659 NR3C2P08235 984 aa21.16■□□□□ 0.98
RNF4-204ENST00000503659 SMARCA1P28370 1054 aa21.16■□□□□ 0.98
RNF4-204ENST00000503659 EPHB4P54760 987 aa21.16■□□□□ 0.98
RNF4-204ENST00000503659 PURAQ00577 322 aaKnown RBP21.16■□□□□ 0.98
RNF4-204ENST00000503659 EXOSC10Q01780 885 aaKnown RBP21.16■□□□□ 0.98
RNF4-204ENST00000503659 SEPT14Q6ZU15 432 aa21.16■□□□□ 0.98
RNF4-204ENST00000503659 CMTR1Q8N1G2 835 aaKnown RBP21.16■□□□□ 0.98
RNF4-204ENST00000503659 TCEANC2Q96MN5 208 aa21.16■□□□□ 0.98
RNF4-204ENST00000503659 PDCD2LQ9BRP1 358 aa21.16■□□□□ 0.98
RNF4-204ENST00000503659 A6NJR5 290 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 GCOM1H8Y6P7 765 aaPredicted RBP21.15■□□□□ 0.98
RNF4-204ENST00000503659 POLR2MP0CAP2 368 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 CALM1P0DP23 149 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 CALM2P0DP24 149 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 CALM3P0DP25 149 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 SLC17A8Q8NDX2 589 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 IL31RAQ8NI17 732 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 RNPC3Q96LT9 517 aaKnown RBP21.15■□□□□ 0.98
RNF4-204ENST00000503659 LZTS2Q9BRK4 669 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 POLR3EQ9NVU0 708 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 SLC12A7Q9Y666 1083 aa21.15■□□□□ 0.98
RNF4-204ENST00000503659 EIF3JO75822 258 aaKnown RBP21.14■□□□□ 0.97
RNF4-204ENST00000503659 RGS20O76081 388 aa21.14■□□□□ 0.97
RNF4-204ENST00000503659 MYL3P08590 195 aa21.14■□□□□ 0.97
RNF4-204ENST00000503659 GNAQP50148 359 aa21.14■□□□□ 0.97
RNF4-204ENST00000503659 ARHGAP1Q07960 439 aa21.14■□□□□ 0.97
RNF4-204ENST00000503659 PPIGQ13427 754 aaKnown RBP eCLIP21.14■□□□□ 0.974e-10■■□□□ 12.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms