RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 PPARAQ07869 468 aa18.64■□□□□ 0.57
DDR1-250ENST00000503628 BRDTQ58F21 947 aaPredicted RBP18.64■□□□□ 0.57
DDR1-250ENST00000503628 TSHZ3Q63HK5 1081 aa18.64■□□□□ 0.57
DDR1-250ENST00000503628 TMCO2Q7Z6W1 182 aaPredicted RBP18.64■□□□□ 0.57
DDR1-250ENST00000503628 GDPD5Q8WTR4 605 aa18.64■□□□□ 0.57
DDR1-250ENST00000503628 COPS5Q92905 334 aa18.64■□□□□ 0.57
DDR1-250ENST00000503628 NACAP1Q9BZK3 213 aa18.64■□□□□ 0.57
DDR1-250ENST00000503628 INCENPQ9NQS7 918 aa18.64■□□□□ 0.57
DDR1-250ENST00000503628 IL17RBQ9NRM6 502 aa18.64■□□□□ 0.57
DDR1-250ENST00000503628 NOD1Q9Y239 953 aa18.64■□□□□ 0.57
DDR1-250ENST00000503628 PIEZO1Q92508 2521 aa18.64■□□□□ 0.57
DDR1-250ENST00000503628 PTPDC1A2A3K4 754 aa18.63■□□□□ 0.57
DDR1-250ENST00000503628 KPNA6O60684 536 aa18.63■□□□□ 0.57
DDR1-250ENST00000503628 PTPN11Q06124 597 aaPredicted RBP18.63■□□□□ 0.57
DDR1-250ENST00000503628 TTBK2Q6IQ55 1244 aa18.63■□□□□ 0.57
DDR1-250ENST00000503628 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
DDR1-250ENST00000503628 ALYREFQ86V81 257 aaKnown RBP18.63■□□□□ 0.57
DDR1-250ENST00000503628 SEC62Q99442 399 aaKnown RBP18.63■□□□□ 0.57
DDR1-250ENST00000503628 ZBED2Q9BTP6 218 aa18.63■□□□□ 0.57
DDR1-250ENST00000503628 NAPBQ9H115 298 aa18.63■□□□□ 0.57
DDR1-250ENST00000503628 RANBP17Q9H2T7 1088 aaKnown RBP18.63■□□□□ 0.57
DDR1-250ENST00000503628 LMCD1Q9NZU5 365 aa18.63■□□□□ 0.57
DDR1-250ENST00000503628 LOC102724159A0A0B4J2E5 919 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 A6NJR5 290 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 TSPY2A6NKD2 308 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 SLC16A2P36021 539 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 CHMP4BP1P59074 171 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 WDR5P61964 334 aaKnown RBP18.62■□□□□ 0.57
DDR1-250ENST00000503628 NUCB1Q02818 461 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 GPNMBQ14956 572 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 PWP2Q15269 919 aaKnown RBP18.62■□□□□ 0.57
DDR1-250ENST00000503628 CCDC96Q2M329 555 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 RAD50Q92878 1312 aa18.62■□□□□ 0.57
DDR1-250ENST00000503628 TTC41PQ6P2S7 1318 aa18.61■□□□□ 0.57
DDR1-250ENST00000503628 SALL3Q9BXA9 1300 aa18.61■□□□□ 0.57
DDR1-250ENST00000503628 NKRFO15226 690 aaKnown RBP eCLIP18.61■□□□□ 0.57
DDR1-250ENST00000503628 CALML3P27482 149 aa18.61■□□□□ 0.57
DDR1-250ENST00000503628 PTGISQ16647 500 aa18.61■□□□□ 0.57
DDR1-250ENST00000503628 LRRFIP1Q32MZ4 808 aaKnown RBP18.61■□□□□ 0.57
DDR1-250ENST00000503628 SLC30A10Q6XR72 485 aa18.61■□□□□ 0.57
DDR1-250ENST00000503628 CHD1LQ86WJ1 897 aa18.61■□□□□ 0.57
DDR1-250ENST00000503628 OTUD7AQ8TE49 926 aaPredicted RBP18.61■□□□□ 0.57
DDR1-250ENST00000503628 LNPKQ9C0E8 428 aa18.61■□□□□ 0.57
DDR1-250ENST00000503628 SUGCTQ9HAC7 445 aa18.61■□□□□ 0.57
DDR1-250ENST00000503628 MTUS1Q9ULD2 1270 aa18.61■□□□□ 0.57
DDR1-250ENST00000503628 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
DDR1-250ENST00000503628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.6■□□□□ 0.57
DDR1-250ENST00000503628 MX1P20591 662 aa18.6■□□□□ 0.57
DDR1-250ENST00000503628 DEFB103AP81534 67 aa18.6■□□□□ 0.57
DDR1-250ENST00000503628 CTDSPL2Q05D32 466 aa18.6■□□□□ 0.57
DDR1-250ENST00000503628 PDE4DQ08499 809 aa18.6■□□□□ 0.57
DDR1-250ENST00000503628 FAM178BQ8IXR5 827 aa18.6■□□□□ 0.57
DDR1-250ENST00000503628 SCFD2Q8WU76 684 aa18.6■□□□□ 0.57
DDR1-250ENST00000503628 CLEC4DQ8WXI8 215 aa18.6■□□□□ 0.57
DDR1-250ENST00000503628 UBE2ZQ9H832 354 aaPredicted RBP18.6■□□□□ 0.57
DDR1-250ENST00000503628 PRR33A8MZF0 331 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 TXNP10599 105 aaKnown RBP18.59■□□□□ 0.57
DDR1-250ENST00000503628 SYDE2Q5VT97 1194 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 BTNL9Q6UXG8 535 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 RNF207Q6ZRF8 634 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 GJD3Q8N144 294 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 CCDC155Q8N6L0 562 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 CAGE1Q8TC20 777 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 AFAP1L1Q8TED9 768 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 DCAF4Q8WV16 495 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 CTAGE1Q96RT6 745 aa18.59■□□□□ 0.57
DDR1-250ENST00000503628 RBAK-RBAKDNI3L0D1 243 aa18.58■□□□□ 0.56
DDR1-250ENST00000503628 EDNRBP24530 442 aa18.58■□□□□ 0.56
DDR1-250ENST00000503628 ERVK-21P61565 698 aa18.58■□□□□ 0.56
DDR1-250ENST00000503628 TCTN1Q2MV58 587 aa18.58■□□□□ 0.56
DDR1-250ENST00000503628 LEXMQ3ZCV2 418 aa18.58■□□□□ 0.56
DDR1-250ENST00000503628 GDF6Q6KF10 455 aaPredicted RBP18.58■□□□□ 0.56
DDR1-250ENST00000503628 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.58■□□□□ 0.56
DDR1-250ENST00000503628 TGS1Q96RS0 853 aaKnown RBP18.58■□□□□ 0.56
DDR1-250ENST00000503628 RAD9AQ99638 391 aa18.58■□□□□ 0.56
DDR1-250ENST00000503628 GPCPD1Q9NPB8 672 aa18.58■□□□□ 0.56
DDR1-250ENST00000503628 FRMPD2Q68DX3 1309 aaPredicted RBP18.57■□□□□ 0.56
DDR1-250ENST00000503628 LINC01553A4QN01 128 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 RANBP6O60518 1105 aaKnown RBP18.57■□□□□ 0.56
DDR1-250ENST00000503628 ARIH2O95376 493 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 GJB5O95377 273 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 SELPP16109 830 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 KCNA5P22460 613 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 NOVP48745 357 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 RPS6P62753 249 aaKnown RBP18.57■□□□□ 0.56
DDR1-250ENST00000503628 CNKSR3Q6P9H4 555 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 LRRC8DQ7L1W4 858 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 PI4K2BQ8TCG2 481 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 DHX38Q92620 1227 aaKnown RBP18.57■□□□□ 0.56
DDR1-250ENST00000503628 UIMC1Q96RL1 719 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 MPHOSPH6Q99547 160 aaKnown RBP18.57■□□□□ 0.56
DDR1-250ENST00000503628 SIP14410 1827 aa18.57■□□□□ 0.56
DDR1-250ENST00000503628 NBNO60934 754 aa18.56■□□□□ 0.56
DDR1-250ENST00000503628 IL9P15248 144 aa18.56■□□□□ 0.56
DDR1-250ENST00000503628 SSTR3P32745 418 aaPredicted RBP18.56■□□□□ 0.56
DDR1-250ENST00000503628 PDE1AP54750 535 aa18.56■□□□□ 0.56
DDR1-250ENST00000503628 DNERQ8NFT8 737 aa18.56■□□□□ 0.56
DDR1-250ENST00000503628 AFG1LQ8WV93 481 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms