RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PSMD1Q99460 953 aa25.2■■□□□ 1.62
PCDH1-204ENST00000503492 PDCL3Q9H2J4 239 aa25.2■■□□□ 1.62
PCDH1-204ENST00000503492 A0A1W2PRG0 241 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 MTF1Q14872 753 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 TMEM119Q4V9L6 283 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 ANO3Q9BYT9 981 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 ZNF277Q9NRM2 450 aaPredicted RBP25.19■■□□□ 1.62
PCDH1-204ENST00000503492 MEIS2O14770 477 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 VIL1P09327 827 aaKnown RBP25.19■■□□□ 1.62
PCDH1-204ENST00000503492 KCNA3P22001 575 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 NCBP1Q09161 790 aaKnown RBP25.19■■□□□ 1.62
PCDH1-204ENST00000503492 KCNK18Q7Z418 384 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 LARGE2Q8N3Y3 721 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 RAD54LQ92698 747 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 P2RX5Q93086 422 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 HPS3Q969F9 1004 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 MAP7D2Q96T17 732 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.19■■□□□ 1.62
PCDH1-204ENST00000503492 TMOD2Q9NZR1 351 aa25.19■■□□□ 1.62
PCDH1-204ENST00000503492 SOWAHDA6NJG2 315 aa25.18■■□□□ 1.62
PCDH1-204ENST00000503492 CCNE1P24864 410 aa25.18■■□□□ 1.62
PCDH1-204ENST00000503492 ECM1Q16610 540 aa25.18■■□□□ 1.62
PCDH1-204ENST00000503492 SYDE2Q5VT97 1194 aa25.18■■□□□ 1.62
PCDH1-204ENST00000503492 KIAA0895Q8NCT3 520 aa25.18■■□□□ 1.62
PCDH1-204ENST00000503492 ANKRD7Q92527 254 aa25.18■■□□□ 1.62
PCDH1-204ENST00000503492 P2RX7Q99572 595 aaKnown RBP25.18■■□□□ 1.62
PCDH1-204ENST00000503492 AMNQ9BXJ7 453 aa25.18■■□□□ 1.62
PCDH1-204ENST00000503492 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.18■■□□□ 1.62
PCDH1-204ENST00000503492 BMP3P12645 472 aa25.18■■□□□ 1.62
PCDH1-204ENST00000503492 EEF1GP26641 437 aaKnown RBP25.18■■□□□ 1.62
PCDH1-204ENST00000503492 NAA30Q147X3 362 aaPredicted RBP25.18■■□□□ 1.62
PCDH1-204ENST00000503492 SYCP1Q15431 976 aa25.18■■□□□ 1.62
PCDH1-204ENST00000503492 NAP1L4Q99733 375 aaKnown RBP25.18■■□□□ 1.62
PCDH1-204ENST00000503492 ZNF70Q9UC06 446 aaPredicted RBP25.18■■□□□ 1.62
PCDH1-204ENST00000503492 HERC5Q9UII4 1024 aaKnown RBP25.18■■□□□ 1.62
PCDH1-204ENST00000503492 ZBTB12Q9Y330 459 aaPredicted RBP25.18■■□□□ 1.62
PCDH1-204ENST00000503492 DPEP1P16444 411 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 CNNM4Q6P4Q7 775 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 CNGA4Q8IV77 575 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 DESI2Q9BSY9 194 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 DNAI1Q9UI46 699 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 ZNF215Q9UL58 517 aaPredicted RBP25.17■■□□□ 1.62
PCDH1-204ENST00000503492 PCDHA12Q9UN75 941 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 MARCH6O60337 910 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 USP11P51784 963 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 UBXN1Q04323 297 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 IKQ13123 557 aaPredicted RBP25.17■■□□□ 1.62
PCDH1-204ENST00000503492 DLGAP5Q15398 846 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 COBLL1Q53SF7 1204 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 ANKRD40Q6AI12 368 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 RAD9BQ6WBX8 426 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 MTERF4Q7Z6M4 381 aaKnown RBP25.17■■□□□ 1.62
PCDH1-204ENST00000503492 NAA15Q9BXJ9 866 aaKnown RBP25.17■■□□□ 1.62
PCDH1-204ENST00000503492 GTPBP4Q9BZE4 634 aaKnown RBP25.17■■□□□ 1.62
PCDH1-204ENST00000503492 L2HGDHQ9H9P8 463 aa25.17■■□□□ 1.62
PCDH1-204ENST00000503492 GOLGB1Q14789 3259 aaKnown RBP25.17■■□□□ 1.62
PCDH1-204ENST00000503492 PHLPP2Q6ZVD8 1323 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 RNF225M0QZC1 329 aaPredicted RBP25.16■■□□□ 1.62
PCDH1-204ENST00000503492 FANCGO15287 622 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 UNC13DQ70J99 1090 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 DYMQ7RTS9 669 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 FBXO11Q86XK2 927 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 CSGALNACT2Q8N6G5 542 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 NOC3LQ8WTT2 800 aaKnown RBP25.16■■□□□ 1.62
PCDH1-204ENST00000503492 PPP1R2P41236 205 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 USH1GQ495M9 461 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 BTNL9Q6UXG8 535 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 FAM151AQ8WW52 585 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 CCDC51Q96ER9 411 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 UIMC1Q96RL1 719 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 SLC39A2Q9NP94 309 aa25.16■■□□□ 1.62
PCDH1-204ENST00000503492 CYP3A7-CYP3A51PA0A087WV96 503 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 PVALEFA0A1B0GWK0 134 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 BICDL2A1A5D9 508 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 LGALS16A8MUM7 142 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 TAL1P17542 331 aaPredicted RBP25.15■■□□□ 1.62
PCDH1-204ENST00000503492 FECHP22830 423 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 CYP3A7P24462 503 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 AP3B2Q13367 1082 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 CRYGNQ8WXF5 182 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 MBOAT7Q96N66 472 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 KCNMB3Q9NPA1 279 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 HDAC9Q9UKV0 1011 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 CNTNAP1P78357 1384 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 ECE1P42892 770 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 SPICE1Q8N0Z3 855 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 MB21D1Q8N884 522 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 ZNF507Q8TCN5 953 aa25.15■■□□□ 1.62
PCDH1-204ENST00000503492 MAGEC2Q9UBF1 373 aaPredicted RBP25.15■■□□□ 1.62
PCDH1-204ENST00000503492 GOLGA6L9A6NEM1 432 aa25.14■■□□□ 1.62
PCDH1-204ENST00000503492 TPM1P09493 284 aa25.14■■□□□ 1.62
PCDH1-204ENST00000503492 DEFB132Q7Z7B7 95 aa25.14■■□□□ 1.62
PCDH1-204ENST00000503492 EEF2KMTQ96G04 330 aa25.14■■□□□ 1.62
PCDH1-204ENST00000503492 OGFOD1Q8N543 542 aa25.13■■□□□ 1.61
PCDH1-204ENST00000503492 TRIM14Q14142 442 aa25.13■■□□□ 1.61
PCDH1-204ENST00000503492 SPDYE2Q495Y8 402 aa25.13■■□□□ 1.61
PCDH1-204ENST00000503492 KIAA1755Q5JYT7 1200 aa25.13■■□□□ 1.61
PCDH1-204ENST00000503492 HYIQ5T013 277 aa25.13■■□□□ 1.61
PCDH1-204ENST00000503492 DDX12PQ92771 950 aa25.13■■□□□ 1.61
PCDH1-204ENST00000503492 SEMA6BQ9H3T3 888 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms