RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 KPNA6O60684 536 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 CKMP06732 381 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 ZGLP1P0C6A0 271 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 CDKN1CP49918 316 aaPredicted RBP11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 NFKB2Q00653 900 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 PAK1Q13153 545 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 STRA8Q7Z7C7 330 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 ANKLE2Q86XL3 938 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 DDX42Q86XP3 938 aaKnown RBP eCLIP11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 LEO1Q8WVC0 666 aaPredicted RBP11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 STAG1Q8WVM7 1258 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 DPF3Q92784 378 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 ALG1Q9BT22 464 aa11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 TIMM13Q9Y5L4 95 aaPredicted RBP11.34□□□□□ -0.59
EXOSC9-203ENST00000503139 MYO1BO43795 1136 aa11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 MED26O95402 600 aa11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 ANGEL2Q5VTE6 544 aaKnown RBP11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 ZNF574Q6ZN55 896 aaPredicted RBP11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 SLCO6A1Q86UG4 719 aa11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 ZC3H7AQ8IWR0 971 aaKnown RBP11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 PPARGC1AQ9UBK2 798 aaKnown RBP11.33□□□□□ -0.6
EXOSC9-203ENST00000503139 NPHS1O60500 1241 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 EYA4O95677 639 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 SPINK2P20155 84 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 ZP2Q05996 745 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 LSAMPQ13449 338 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 DHCR24Q15392 516 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 RALGPS1Q5JS13 557 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 PIK3R6Q5UE93 754 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 NFXL1Q6ZNB6 911 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 UBE2R2Q712K3 238 aaPredicted RBP11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 DTX1Q86Y01 620 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 Q8N1Y9 231 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 ADAMTS10Q9H324 1103 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 SAMD15Q9P1V8 674 aa11.32□□□□□ -0.6
EXOSC9-203ENST00000503139 GLRX3O76003 335 aaKnown RBP11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 SOD2P04179 222 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 APPP05067 770 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 CDK11BP21127 795 aaKnown RBP11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 GRK2P25098 689 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 GRK3P35626 688 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 BCL6P41182 706 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 KIR2DL1P43626 348 aaPredicted RBP11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 KIR2DL2P43627 348 aaPredicted RBP11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 CD97P48960 835 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 GTF2A2P52657 109 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 RPL11P62913 178 aaKnown RBP11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 DUSP4Q13115 394 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 IGSF22Q8N9C0 903 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 ALPK1Q96QP1 1244 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 JMJD8Q96S16 334 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 CELF4Q9BZC1 486 aaKnown RBP11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 IPPKQ9H8X2 491 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 DDX56Q9NY93 547 aaKnown RBP11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 SLAMF8Q9P0V8 285 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 CCDC39Q9UFE4 941 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 COQ6Q9Y2Z9 468 aa11.31□□□□□ -0.6
EXOSC9-203ENST00000503139 KIAA1324LA8MWY0 1029 aaPredicted RBP11.3□□□□□ -0.6
EXOSC9-203ENST00000503139 VSIG10LQ86VR7 867 aa11.3□□□□□ -0.6
EXOSC9-203ENST00000503139 SYTL4Q96C24 671 aaPredicted RBP11.3□□□□□ -0.6
EXOSC9-203ENST00000503139 MCM8Q9UJA3 840 aa11.3□□□□□ -0.6
EXOSC9-203ENST00000503139 TMEM59LQ9UK28 342 aa11.3□□□□□ -0.6
EXOSC9-203ENST00000503139 A0A1W2PQ45 241 aaPredicted RBP11.29□□□□□ -0.6
EXOSC9-203ENST00000503139 A0A1W2PQY0 241 aa11.29□□□□□ -0.6
EXOSC9-203ENST00000503139 CBX4O00257 560 aa11.29□□□□□ -0.6
EXOSC9-203ENST00000503139 PPP1R11O60927 126 aaPredicted RBP11.29□□□□□ -0.6
EXOSC9-203ENST00000503139 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
EXOSC9-203ENST00000503139 WNK4Q96J92 1243 aa11.29□□□□□ -0.6
EXOSC9-203ENST00000503139 TYW1Q9NV66 732 aaKnown RBP11.29□□□□□ -0.6
EXOSC9-203ENST00000503139 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
EXOSC9-203ENST00000503139 KIF18BQ86Y91 864 aa11.28□□□□□ -0.6
EXOSC9-203ENST00000503139 NLGN2Q8NFZ4 835 aa11.28□□□□□ -0.6
EXOSC9-203ENST00000503139 CLDND1Q9NY35 253 aa11.28□□□□□ -0.6
EXOSC9-203ENST00000503139 GULP1Q9UBP9 304 aa11.28□□□□□ -0.6
EXOSC9-203ENST00000503139 FAM47E-STBD1D6RA91 191 aa11.27□□□□□ -0.61
EXOSC9-203ENST00000503139 H7BY64 318 aa11.27□□□□□ -0.61
EXOSC9-203ENST00000503139 EVA1CP58658 441 aa11.27□□□□□ -0.61
EXOSC9-203ENST00000503139 STRN3Q13033 797 aa11.27□□□□□ -0.61
EXOSC9-203ENST00000503139 ANKS4BQ8N8V4 417 aa11.27□□□□□ -0.61
EXOSC9-203ENST00000503139 FBXW5Q969U6 566 aa11.27□□□□□ -0.61
EXOSC9-203ENST00000503139 CCDC66A2RUB6 948 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 NOTOA8MTQ0 251 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 M0R2C6 588 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 TRAF5O00463 557 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 PYGMP11217 842 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 MECP2P51608 486 aaKnown RBP11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 CORO7P57737 925 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 SKOR2Q2VWA4 1001 aaPredicted RBP11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 HSF5Q4G112 596 aaPredicted RBP11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 TMEM177Q53S58 311 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 C16orf59Q7L2K0 433 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 OVCH1Q7RTY7 1134 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 CHAMP1Q96JM3 812 aa11.26□□□□□ -0.61
EXOSC9-203ENST00000503139 MTA3Q9BTC8 594 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms