RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 HOXB1P14653 301 aaPredicted RBP12.57□□□□□ -0.4
SNCA-207ENST00000502987 FOSL2P15408 326 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 MRPL12P52815 198 aaKnown RBP12.57□□□□□ -0.4
SNCA-207ENST00000502987 PSMC6P62333 389 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 NUCB1Q02818 461 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 BRDTQ58F21 947 aaPredicted RBP12.57□□□□□ -0.4
SNCA-207ENST00000502987 CCDC178Q5BJE1 867 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 MAFAQ8NHW3 353 aaPredicted RBP12.57□□□□□ -0.4
SNCA-207ENST00000502987 UBA5Q9GZZ9 404 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 TTYH1Q9H313 450 aaPredicted RBP12.57□□□□□ -0.4
SNCA-207ENST00000502987 HIPK3Q9H422 1215 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 KAT14Q9H8E8 782 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 Q9Y3F1 56 aa12.57□□□□□ -0.4
SNCA-207ENST00000502987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
SNCA-207ENST00000502987 B4E1Z4 1266 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 KDM4AO75164 1064 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 DNAJB2P25686 324 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 CCL23P55773 120 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 CHMP4BP1P59074 171 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 NKX3-2P78367 333 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 IMMTQ16891 758 aaKnown RBP12.56□□□□□ -0.4
SNCA-207ENST00000502987 DUSP28Q4G0W2 176 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 TMEM240Q5SV17 173 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
SNCA-207ENST00000502987 SLC30A10Q6XR72 485 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 ZNF365Q70YC5 407 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 PNMA1Q8ND90 353 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 OR6J1Q8NGC5 347 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
SNCA-207ENST00000502987 SEZ6LQ9BYH1 1024 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 TRPV6Q9H1D0 765 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 CPVLQ9H3G5 476 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 VAT1LQ9HCJ6 419 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 CTNNA3Q9UI47 895 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 PRUNE2Q8WUY3 3088 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 LRRC37A2A6NM11 1700 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 NEDD4P46934 1319 aa12.56□□□□□ -0.4
SNCA-207ENST00000502987 LOC102724159A0A0B4J2E5 919 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 CD4P01730 458 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 FGBP02675 491 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 CPT1AP50416 773 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 RPS6P62753 249 aaKnown RBP12.55□□□□□ -0.4
SNCA-207ENST00000502987 PWP2Q15269 919 aaKnown RBP12.55□□□□□ -0.4
SNCA-207ENST00000502987 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 PSRC1Q6PGN9 363 aaPredicted RBP12.55□□□□□ -0.4
SNCA-207ENST00000502987 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 C16orf59Q7L2K0 433 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 DGKHQ86XP1 1220 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 MORC4Q8TE76 937 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 CLEC4DQ8WXI8 215 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 TIFAQ96CG3 184 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 MTIF3Q9H2K0 278 aaKnown RBP12.55□□□□□ -0.4
SNCA-207ENST00000502987 OSBPL3Q9H4L5 887 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 IL23AQ9NPF7 189 aa12.55□□□□□ -0.4
SNCA-207ENST00000502987 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 TMEM265A0A087WTH1 108 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 GRXCR1A8MXD5 290 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 B4GALT4O60513 344 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 PPP2R5BQ15173 497 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 RPUSD2Q8IZ73 545 aaKnown RBP12.54□□□□□ -0.4
SNCA-207ENST00000502987 SLC43A3Q8NBI5 491 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 DNERQ8NFT8 737 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 SCFD2Q8WU76 684 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 ZSCAN10Q96SZ4 725 aaPredicted RBP12.54□□□□□ -0.4
SNCA-207ENST00000502987 UBAC1Q9BSL1 405 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 KRT23Q9C075 422 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 ZNF576Q9H609 170 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 ZSWIM5Q9P217 1185 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 MSRAQ9UJ68 235 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 GRIN2DO15399 1336 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 WDR19Q8NEZ3 1342 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 RAD50Q92878 1312 aa12.54□□□□□ -0.4
SNCA-207ENST00000502987 LAMA4Q16363 1823 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 ZBBXA8MT70 800 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
SNCA-207ENST00000502987 SUPT20HL2P0C7V6 817 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 SNHG28P0DPA3 235 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 TXNP10599 105 aaKnown RBP12.53□□□□□ -0.4
SNCA-207ENST00000502987 GRIN2CQ14957 1233 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 CDC37Q16543 378 aaPredicted RBP12.53□□□□□ -0.4
SNCA-207ENST00000502987 OTOP2Q7RTS6 562 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 ADGRF4Q8IZF3 695 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 GAS2L1Q99501 681 aaPredicted RBP12.53□□□□□ -0.4
SNCA-207ENST00000502987 MTG1Q9BT17 334 aaPredicted RBP12.53□□□□□ -0.4
SNCA-207ENST00000502987 DSCC1Q9BVC3 393 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 CNNM2Q9H8M5 875 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
SNCA-207ENST00000502987 CUL9Q8IWT3 2517 aa12.52□□□□□ -0.4
SNCA-207ENST00000502987 RBM47A0AV96 593 aaKnown RBP12.52□□□□□ -0.41
SNCA-207ENST00000502987 NKRFO15226 690 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNCA-207ENST00000502987 KPNA6O60684 536 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 CYP2C9P11712 490 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 PBX2P40425 430 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 NT5C2P49902 561 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 TTLL4Q14679 1199 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 ASPRV1Q53RT3 343 aa12.52□□□□□ -0.41
SNCA-207ENST00000502987 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
SNCA-207ENST00000502987 SEPT14Q6ZU15 432 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms