RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 INCENPQ9NQS7 918 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 PDGFCQ9NRA1 345 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 TLR7Q9NYK1 1049 aaKnown RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 COG6Q9Y2V7 657 aa6.06□□□□□ -1.44
HTT-202ENST00000502820 PRRC2BQ5JSZ5 2229 aaKnown RBP6.06□□□□□ -1.44
HTT-202ENST00000502820 CHD9Q3L8U1 2897 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 A0A0G2JMZ2 1700 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 ASTN1O14525 1302 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 C19orf67A6NJJ6 358 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 MBTPS2O43462 519 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 BAIAP3O94812 1187 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 PDGFBP01127 241 aaPredicted RBP6.05□□□□□ -1.44
HTT-202ENST00000502820 CYP2D6P10635 497 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 EEF2P13639 858 aaKnown RBP6.05□□□□□ -1.44
HTT-202ENST00000502820 AKR1B1P15121 316 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 RFC2P35250 354 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 NUCB2P80303 420 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 SLC20A2Q08357 652 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 IKBKEQ14164 716 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 PTGISQ16647 500 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 EPC2Q52LR7 807 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 MAMDC4Q6UXC1 1216 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 BMP8AQ7Z5Y6 402 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 ERC1Q8IUD2 1116 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 PDCL2Q8N4E4 241 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 SLC43A3Q8NBI5 491 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 OR6J1Q8NGC5 347 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 RMDN1Q96DB5 314 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 SLF1Q9BQI6 1058 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 C22orf23Q9BZE7 217 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 TSPYL1Q9H0U9 437 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 EHD4Q9H223 541 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 MFSD1Q9H3U5 465 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 GOPCQ9HD26 462 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 ZNF214Q9UL59 606 aaPredicted RBP6.05□□□□□ -1.44
HTT-202ENST00000502820 PPP1R9AQ9ULJ8 1098 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 ZKSCAN5Q9Y2L8 839 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 USP34Q70CQ2 3546 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 CHD7Q9P2D1 2997 aa6.05□□□□□ -1.44
HTT-202ENST00000502820 COL4A6Q14031 1691 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 CFAP54Q96N23 3096 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 MYH2Q9UKX2 1941 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 MAGEB6P1A0A0J9YX57 407 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 LINC01565O15544 149 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 GJB5O95377 273 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 TPM3P06753 285 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 KCNA4P22459 653 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 HDAC1Q13547 482 aaPredicted RBP6.04□□□□□ -1.44
HTT-202ENST00000502820 SMAD2Q15796 467 aaKnown RBP6.04□□□□□ -1.44
HTT-202ENST00000502820 ST3GAL2Q16842 350 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 HSP90AB4PQ58FF6 505 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 C20orf194Q5TEA3 1177 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.04□□□□□ -1.44
HTT-202ENST00000502820 RBM23Q86U06 439 aaKnown RBP6.04□□□□□ -1.44
HTT-202ENST00000502820 RPAP2Q8IXW5 612 aaPredicted RBP6.04□□□□□ -1.44
HTT-202ENST00000502820 CCDC155Q8N6L0 562 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 FAM184AQ8NB25 1140 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 RHPN1Q8TCX5 695 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 SDR42E1Q8WUS8 393 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 MTG1Q9BT17 334 aaPredicted RBP6.04□□□□□ -1.44
HTT-202ENST00000502820 PANK2Q9BZ23 570 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 CCDC8Q9H0W5 538 aaPredicted RBP6.04□□□□□ -1.44
HTT-202ENST00000502820 POLR3EQ9NVU0 708 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 CD207Q9UJ71 328 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 DDX19BQ9UMR2 479 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 EXOC6BQ9Y2D4 811 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 TMX2Q9Y320 296 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 INSL6Q9Y581 213 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 ROBO3Q96MS0 1386 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 C5orf42Q9H799 3197 aa6.04□□□□□ -1.44
HTT-202ENST00000502820 UQCRHLA0A096LP55 91 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 ASB14A6NK59 587 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 GALR2O43603 387 aaPredicted RBP6.03□□□□□ -1.44
HTT-202ENST00000502820 MBD3O95983 291 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 AMHP03971 560 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 UQCRHP07919 91 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 IBSPP21815 317 aaPredicted RBP6.03□□□□□ -1.44
HTT-202ENST00000502820 CTNNB1P35222 781 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 CPT1AP50416 773 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 SNAP25P60880 206 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 PDE4BQ07343 736 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 PDE4CQ08493 712 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 SIGLEC14Q08ET2 396 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 SMAD4Q13485 552 aaKnown RBP6.03□□□□□ -1.44
HTT-202ENST00000502820 SYCP1Q15431 976 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 BRDTQ58F21 947 aaPredicted RBP6.03□□□□□ -1.44
HTT-202ENST00000502820 IQSEC1Q6DN90 963 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 CNKSR3Q6P9H4 555 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 TMED8Q6PL24 325 aaPredicted RBP6.03□□□□□ -1.44
HTT-202ENST00000502820 LRRC8DQ7L1W4 858 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 ZNF467Q7Z7K2 595 aaPredicted RBP6.03□□□□□ -1.44
HTT-202ENST00000502820 AACSQ86V21 672 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 SIAH1Q8IUQ4 282 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 AMOTL1Q8IY63 956 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 TMEM192Q8IY95 271 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 SYAP1Q96A49 352 aaPredicted RBP6.03□□□□□ -1.44
HTT-202ENST00000502820 KIF1BPQ96EK5 621 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 PURBQ96QR8 312 aaKnown RBP6.03□□□□□ -1.44
HTT-202ENST00000502820 APOL5Q9BWW9 433 aa6.03□□□□□ -1.44
HTT-202ENST00000502820 WDR11Q9BZH6 1224 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms