RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 SLC4A3P48751 1232 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 ACVR2BQ13705 512 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 PKN1Q16512 942 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 TRIM22Q8IYM9 498 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 TRPV1Q8NER1 839 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 SHISA4Q96DD7 197 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 ZMYND12Q9H0C1 365 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 TPCN1Q9ULQ1 816 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 FRMPD3Q5JV73 1810 aa12.36□□□□□ -0.43
UBE2D3-212ENST00000502563 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 STXBP3O00186 592 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 CPLX1O14810 134 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 NKRFO15226 690 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 DUSP11O75319 330 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 DEXIO95424 95 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 CFBP00751 764 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 FOSP01100 380 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 CST5P28325 142 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 CCND3P30281 292 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 MCM2P49736 904 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 SCRN1Q12765 414 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 WWC2Q6AWC2 1192 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 IQSEC1Q6DN90 963 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 CUL5Q93034 780 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 GTF3C6Q969F1 213 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 ZSCAN31Q96LW9 406 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 DEFB118Q96PH6 123 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 RMDN3Q96TC7 470 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 PDCD2LQ9BRP1 358 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 PSTPIP2Q9H939 334 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 RIC8AQ9NPQ8 531 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 PXMP2Q9NR77 195 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 SH2B1Q9NRF2 756 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 COL20A1Q9P218 1284 aa12.35□□□□□ -0.43
UBE2D3-212ENST00000502563 ST18O60284 1047 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 RARBP10826 455 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 TAL1P17542 331 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 CALML3P27482 149 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 GNA11P29992 359 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 CLK2P49760 499 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 AKAP17AQ02040 695 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 STXBP2Q15833 593 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 GALNT17Q6IS24 598 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 TAPT1Q6NXT6 567 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 KCNV1Q6PIU1 500 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 RAB11FIP4Q86YS3 637 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 ARRDC4Q8NCT1 418 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 TBC1D5Q92609 795 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 UPF3AQ9H1J1 476 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 LIMCH1Q9UPQ0 1083 aa12.34□□□□□ -0.43
UBE2D3-212ENST00000502563 MCM3APO60318 1980 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 DNM1LO00429 736 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 EIF3JO75822 258 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 NR3C2P08235 984 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 TGFB3P10600 412 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 SSRP1Q08945 709 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 ME3Q16798 604 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 DUSP28Q4G0W2 176 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 HEATR3Q7Z4Q2 680 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 VSIG10LQ86VR7 867 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 CCDC82Q8N4S0 544 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 SCFD2Q8WU76 684 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 TAAR1Q96RJ0 339 aa12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 LLPHQ9BRT6 129 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 NAP1L2Q9ULW6 460 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 GNEQ9Y223 722 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-212ENST00000502563 MAFGO15525 162 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 ADAMTS4O75173 837 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 COL6A1P12109 1028 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 CD44P16070 742 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 NAPAP54920 295 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 GJA9P57773 515 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 PDE4DQ08499 809 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 PGM5Q15124 567 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 CCDC144BQ3MJ40 725 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 ARHGEF16Q5VV41 709 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 PCNX4Q63HM2 1172 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 DAGLBQ8NCG7 672 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 SMARCC2Q8TAQ2 1214 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 WASF1Q92558 559 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 EMID1Q96A84 441 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 INPP4AQ96PE3 977 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 SEZ6LQ9BYH1 1024 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 EHMT1Q9H9B1 1298 aa12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 NCOA5Q9HCD5 579 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-212ENST00000502563 SMCO2A6NFE2 343 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 MOXD2PA6NHM9 499 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 TFRCP02786 760 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms