RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 PRR12Q9ULL5 1215 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
UBE2D3-211ENST00000502404 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 DYNC1LI2O43237 492 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 ORC4O43929 436 aa13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 FSCN1Q16658 493 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 TLK2Q86UE8 772 aa13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 FAM126BQ8IXS8 530 aa13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 TIFAQ96CG3 184 aa13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.315e-7■■■■□ 24.9
UBE2D3-211ENST00000502404 VTA1Q9NP79 307 aa13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 ZNF536O15090 1300 aa13.12□□□□□ -0.31
UBE2D3-211ENST00000502404 SOWAHBA6NEL2 793 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 B4DLN1 442 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 ICAM1P05362 532 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 TOP1P11387 765 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 MRPL12P52815 198 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 ITGA7Q13683 1181 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 BRDTQ58F21 947 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 TMEM240Q5SV17 173 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 OTUD7AQ8TE49 926 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 CHMP4CQ96CF2 233 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 ZNF576Q9H609 170 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 CYP39A1Q9NYL5 469 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 MSRAQ9UJ68 235 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 MTMR7Q9Y216 660 aa13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 GNEQ9Y223 722 aaKnown RBP13.11□□□□□ -0.31
UBE2D3-211ENST00000502404 LAMA2P24043 3122 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 ADCY6O43306 1168 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 CD4P01730 458 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 FGBP02675 491 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 CSF2RAP15509 400 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 MFAP1P55081 439 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 BEX3Q00994 111 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 RAB30Q15771 203 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 MCMDC2Q4G0Z9 681 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 SWT1Q5T5J6 900 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 RPUSD2Q8IZ73 545 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 SLC43A3Q8NBI5 491 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 TTC14Q96N46 770 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 GAS2L1Q99501 681 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 IL23AQ9NPF7 189 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
UBE2D3-211ENST00000502404 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 CTAGE5O15320 804 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 NMT2O60551 498 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 FGRP09769 529 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 SUPT20HL2P0C7V6 817 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 SMPD1P17405 629 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 NOVP48745 357 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 NT5C2P49902 561 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 GRIN2CQ14957 1233 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 ZNF365Q70YC5 407 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 TCP11L1Q9NUJ3 509 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 RAD50Q92878 1312 aa13.09□□□□□ -0.31
UBE2D3-211ENST00000502404 FGAP02671 866 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 CYP2C18P33260 490 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 CPT1AP50416 773 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 PDE1AP54750 535 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 SNAP25P60880 206 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 AAMPQ13685 434 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 BAATQ14032 418 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 DUSP28Q4G0W2 176 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 RASIP1Q5U651 963 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 TAPT1Q6NXT6 567 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 C16orf59Q7L2K0 433 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 EEPD1Q7L9B9 569 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 MORC4Q8TE76 937 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 HERVK_113Q902F9 699 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 INCENPQ9NQS7 918 aa13.08□□□□□ -0.32
UBE2D3-211ENST00000502404 PTPDC1A2A3K4 754 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 NKRFO15226 690 aaKnown RBP eCLIP13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 KPNA6O60684 536 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 ACRP10323 421 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 SLC16A2P36021 539 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 HDAC1Q13547 482 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms