RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 GRAMD1CQ8IYS0 662 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 CHCHD4Q8N4Q1 142 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 JMYQ8N9B5 988 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 PPP1R13BQ96KQ4 1090 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 TIGD1Q96MW7 591 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 NELL2Q99435 816 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 RTFDC1Q9BY42 306 aaPredicted RBP10.06□□□□□ -0.8
FN1-227ENST00000498719 KMT5AQ9NQR1 393 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.06□□□□□ -0.8
FN1-227ENST00000498719 DOT1LQ8TEK3 1739 aa10.06□□□□□ -0.8
FN1-227ENST00000498719 BCORQ6W2J9 1755 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 MINDY4BA8MYZ0 360 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 IKBKBO14920 756 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 SERPINC1P01008 464 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 MMP1P03956 469 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 CASP2P42575 452 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 CRKLP46109 303 aaKnown RBP10.05□□□□□ -0.8
FN1-227ENST00000498719 UBASH3AP57075 661 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 MYL5Q02045 173 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 WTAPQ15007 396 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 RTN1Q16799 776 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 ZNF827Q17R98 1081 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 USP49Q70CQ1 688 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 CPXCR1Q8N123 301 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 SERINC2Q96SA4 455 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 CXorf56Q9H5V9 222 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 LRP2BPQ9P2M1 347 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 ABCF2Q9UG63 623 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 PCDHB6Q9Y5E3 794 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 RCCD1A6NED2 376 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 CUTAO60888 179 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 ZSCAN20P17040 1043 aaPredicted RBP10.05□□□□□ -0.8
FN1-227ENST00000498719 ATP6V1AP38606 617 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 TPM4P67936 248 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 CFAP100Q494V2 611 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 THNSL2Q86YJ6 484 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 SMAP1Q8IYB5 467 aaPredicted RBP10.05□□□□□ -0.8
FN1-227ENST00000498719 LRRN4CLQ8ND94 238 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 RASGRP4Q8TDF6 673 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 SNRNP27Q8WVK2 155 aaKnown RBP10.05□□□□□ -0.8
FN1-227ENST00000498719 SHISA4Q96DD7 197 aa10.05□□□□□ -0.8
FN1-227ENST00000498719 UTP14AQ9BVJ6 771 aaKnown RBP10.05□□□□□ -0.8
FN1-227ENST00000498719 CYP2D7A0A087X1C5 515 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 FAM237AA0A1B0GTK4 181 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 A6NCN8 305 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 POLR2DO15514 142 aaKnown RBP10.04□□□□□ -0.8
FN1-227ENST00000498719 FZD6O60353 706 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 CHRNDQ07001 517 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 MEI1Q5TIA1 1274 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 SYT10Q6XYQ8 523 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 SIX5Q8N196 739 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 PHTF2Q8N3S3 785 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 CCDC150Q8NCX0 1101 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 KIF18AQ8NI77 898 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 SKA1Q96BD8 255 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 KRT23Q9C075 422 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 CNNM2Q9H8M5 875 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 NIP7Q9Y221 180 aaKnown RBP eCLIP10.04□□□□□ -0.82e-52■□□□□ 11.1
FN1-227ENST00000498719 PHLPP1O60346 1717 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 TIAM2Q8IVF5 1701 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 STK36Q9NRP7 1315 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 CAMTA2O94983 1202 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 CYP7A1P22680 504 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 HALP42357 657 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 GYG1P46976 350 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 SARSP49591 514 aaKnown RBP10.04□□□□□ -0.8
FN1-227ENST00000498719 PPM1FP49593 454 aaPredicted RBP10.04□□□□□ -0.8
FN1-227ENST00000498719 CLK1P49759 484 aaKnown RBP10.04□□□□□ -0.8
FN1-227ENST00000498719 ATP2B2Q01814 1243 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 ITPK1Q13572 414 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 MTMR2Q13614 643 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 ELF2Q15723 593 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 TRMT44Q8IYL2 757 aaKnown RBP10.04□□□□□ -0.8
FN1-227ENST00000498719 CRACR2BQ8N4Y2 399 aaPredicted RBP10.04□□□□□ -0.8
FN1-227ENST00000498719 ZNF513Q8N8E2 541 aaPredicted RBP10.04□□□□□ -0.8
FN1-227ENST00000498719 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 TRMT2BQ96GJ1 504 aaKnown RBP10.04□□□□□ -0.8
FN1-227ENST00000498719 INTS13Q9NVM9 706 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 FBXO2Q9UK22 296 aaPredicted RBP10.04□□□□□ -0.8
FN1-227ENST00000498719 SYNPO2Q9UMS6 1093 aa10.04□□□□□ -0.8
FN1-227ENST00000498719 PRDM1O75626 825 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 IGHMBP2P38935 993 aaKnown RBP10.03□□□□□ -0.8
FN1-227ENST00000498719 EVX2Q03828 476 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 PPARAQ07869 468 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 SYCP1Q15431 976 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 NBPF9Q3BBW0 867 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 CCDC152Q4G0S7 254 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 TRIM22Q8IYM9 498 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 FANCBQ8NB91 859 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 NACAP1Q9BZK3 213 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 NIF3L1Q9GZT8 377 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 CD248Q9HCU0 757 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 CABP5Q9NP86 173 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 KCND1Q9NSA2 647 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 SERTAD1Q9UHV2 236 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 PRDM4Q9UKN5 801 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 AK5Q9Y6K8 562 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 PNPLA7Q6ZV29 1317 aa10.03□□□□□ -0.8
FN1-227ENST00000498719 ERICH2A1L162 156 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms