RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 NECTIN1Q15223 517 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 FAM109BQ6ICB4 259 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-207ENST00000498698 MFSD5Q6N075 450 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 CATIPQ7Z7H3 387 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 COPS5Q92905 334 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 PIGSQ96S52 555 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 IWS1Q96ST2 819 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 RMDN3Q96TC7 470 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 MTA3Q9BTC8 594 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 LY9Q9HBG7 655 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-207ENST00000498698 POLR3EQ9NVU0 708 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 PCDHA1Q9Y5I3 950 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 PLXNA1Q9UIW2 1896 aa11.01□□□□□ -0.65
HMGCL-207ENST00000498698 PNMA6FA0A0J9YX94 578 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 A6NJR5 290 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 PRC1O43663 620 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 CFBP00751 764 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 CPT1AP50416 773 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 TTLL4Q14679 1199 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 STXBP2Q15833 593 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 CREB3L3Q68CJ9 461 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 C16orf59Q7L2K0 433 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 HOMER1Q86YM7 354 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 SAMD3Q8N6K7 520 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 MAP3K14Q99558 947 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 TRPV6Q9H1D0 765 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 PXMP2Q9NR77 195 aa11□□□□□ -0.65
HMGCL-207ENST00000498698 MAP3K20Q9NYL2 800 aaKnown RBP11□□□□□ -0.65
HMGCL-207ENST00000498698 B4GALT4O60513 344 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 KPNA6O60684 536 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 EIF3JO75822 258 aaKnown RBP10.99□□□□□ -0.65
HMGCL-207ENST00000498698 DDAH1O94760 285 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 NR3C2P08235 984 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 MYL3P08590 195 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 CSF2RAP15509 400 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 EIF2AK2P19525 551 aaKnown RBP10.99□□□□□ -0.65
HMGCL-207ENST00000498698 MCM5P33992 734 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 SMAD3P84022 425 aaKnown RBP10.99□□□□□ -0.65
HMGCL-207ENST00000498698 TRAF1Q13077 416 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 ARHGEF16Q5VV41 709 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 SEPT14Q6ZU15 432 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 ZNF654Q8IZM8 581 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 RNPC3Q96LT9 517 aaKnown RBP10.99□□□□□ -0.65
HMGCL-207ENST00000498698 MTG1Q9BT17 334 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-207ENST00000498698 PPP1R12CQ9BZL4 782 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 ALDH8A1Q9H2A2 487 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-207ENST00000498698 ANO2Q9NQ90 1003 aa10.99□□□□□ -0.65
HMGCL-207ENST00000498698 LAMA4Q16363 1823 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 SH2B2O14492 632 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-207ENST00000498698 SMARCA1P28370 1054 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 HOXA13P31271 388 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-207ENST00000498698 CYP2C18P33260 490 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 ARHGAP1Q07960 439 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 PPIGQ13427 754 aaKnown RBP eCLIP10.98□□□□□ -0.65
HMGCL-207ENST00000498698 LY6KQ17RY6 165 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 NBPF20Q3BBV1 942 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 BRDTQ58F21 947 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-207ENST00000498698 TMEM240Q5SV17 173 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 CASC1Q6TDU7 716 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 TMTC2Q8N394 836 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 TMEM199Q8N511 208 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 AFG1LQ8WV93 481 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 TMEM87BQ96K49 555 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.98□□□□□ -0.65
HMGCL-207ENST00000498698 PDCD2LQ9BRP1 358 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 MYL10Q9BUA6 226 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 NOC4LQ9BVI4 516 aaKnown RBP10.98□□□□□ -0.65
HMGCL-207ENST00000498698 SPZ1Q9BXG8 430 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 HIPK3Q9H422 1215 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 DDX41Q9UJV9 622 aaKnown RBP10.98□□□□□ -0.65
HMGCL-207ENST00000498698 UMODL1Q5DID0 1318 aa10.98□□□□□ -0.65
HMGCL-207ENST00000498698 GCOM1H8Y6P7 765 aaPredicted RBP10.97□□□□□ -0.65
HMGCL-207ENST00000498698 RGS20O76081 388 aa10.97□□□□□ -0.65
HMGCL-207ENST00000498698 GH1P01241 217 aa10.97□□□□□ -0.65
HMGCL-207ENST00000498698 POLR2MP0CAP2 368 aa10.97□□□□□ -0.65
HMGCL-207ENST00000498698 KIF5BP33176 963 aa10.97□□□□□ -0.65
HMGCL-207ENST00000498698 LIFRP42702 1097 aa10.97□□□□□ -0.65
HMGCL-207ENST00000498698 RASIP1Q5U651 963 aa10.97□□□□□ -0.65
HMGCL-207ENST00000498698 VSIG10LQ86VR7 867 aa10.97□□□□□ -0.65
HMGCL-207ENST00000498698 CTCFLQ8NI51 663 aaPredicted RBP10.97□□□□□ -0.65
HMGCL-207ENST00000498698 EMID1Q96A84 441 aaPredicted RBP10.97□□□□□ -0.65
HMGCL-207ENST00000498698 TRMT13Q9NUP7 481 aaKnown RBP10.97□□□□□ -0.65
HMGCL-207ENST00000498698 STXBP5LQ9Y2K9 1186 aa10.97□□□□□ -0.65
HMGCL-207ENST00000498698 MCM3APO60318 1980 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 CCDC69A6NI79 296 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 PLEKHA8P1O95397 391 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 MMP3P08254 477 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 SUPT20HL2P0C7V6 817 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 ACRP10323 421 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 CYP2C9P11712 490 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 MYCLP12524 364 aaPredicted RBP10.96□□□□□ -0.65
HMGCL-207ENST00000498698 GNAQP50148 359 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 CCL23P55773 120 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 PGM5Q15124 567 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 NFRKBQ6P4R8 1299 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 NFXL1Q6ZNB6 911 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 ZNF365Q70YC5 407 aa10.96□□□□□ -0.65
HMGCL-207ENST00000498698 FCHSD1Q86WN1 690 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms