RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 SEC23AQ15436 765 aa26.34■■□□□ 1.81
CDKN2A-208ENST00000498124 CYB5R4Q7L1T6 521 aa26.34■■□□□ 1.81
CDKN2A-208ENST00000498124 SYTL5Q8TDW5 730 aaPredicted RBP26.34■■□□□ 1.81
CDKN2A-208ENST00000498124 SCFD2Q8WU76 684 aa26.34■■□□□ 1.81
CDKN2A-208ENST00000498124 CNNM2Q9H8M5 875 aa26.34■■□□□ 1.81
CDKN2A-208ENST00000498124 POLR3EQ9NVU0 708 aa26.34■■□□□ 1.81
CDKN2A-208ENST00000498124 RAD50Q92878 1312 aa26.34■■□□□ 1.81
CDKN2A-208ENST00000498124 GRXCR1A8MXD5 290 aa26.33■■□□□ 1.81
CDKN2A-208ENST00000498124 PARP1P09874 1014 aaKnown RBP26.33■■□□□ 1.81
CDKN2A-208ENST00000498124 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.33■■□□□ 1.81
CDKN2A-208ENST00000498124 TRMT13Q9NUP7 481 aaKnown RBP26.33■■□□□ 1.81
CDKN2A-208ENST00000498124 CXXC1Q9P0U4 656 aaPredicted RBP26.33■■□□□ 1.81
CDKN2A-208ENST00000498124 NKRFO15226 690 aaKnown RBP eCLIP26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 MYL3P08590 195 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 PBX2P40425 430 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 CCL23P55773 120 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 GRIN2CQ14957 1233 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 STAG2Q8N3U4 1231 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 MAFAQ8NHW3 353 aaPredicted RBP26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 RUFY2Q8WXA3 655 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 HERVK_113Q902F9 699 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 MPHOSPH6Q99547 160 aaKnown RBP26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 UBAC1Q9BSL1 405 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 MTG1Q9BT17 334 aaPredicted RBP26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 PBX4Q9BYU1 374 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 MAF1Q9H063 256 aa26.32■■□□□ 1.8
CDKN2A-208ENST00000498124 A6NJR5 290 aa26.31■■□□□ 1.8
CDKN2A-208ENST00000498124 CHMLP26374 656 aa26.31■■□□□ 1.8
CDKN2A-208ENST00000498124 CCDC62Q6P9F0 684 aa26.31■■□□□ 1.8
CDKN2A-208ENST00000498124 TIFAQ96CG3 184 aa26.31■■□□□ 1.8
CDKN2A-208ENST00000498124 TAAR1Q96RJ0 339 aa26.31■■□□□ 1.8
CDKN2A-208ENST00000498124 TAF6LQ9Y6J9 622 aa26.31■■□□□ 1.8
CDKN2A-208ENST00000498124 OPLAHO14841 1288 aa26.3■■□□□ 1.8
CDKN2A-208ENST00000498124 FOSL2P15408 326 aa26.3■■□□□ 1.8
CDKN2A-208ENST00000498124 PTH1RQ03431 593 aa26.3■■□□□ 1.8
CDKN2A-208ENST00000498124 SLC35G1Q2M3R5 365 aa26.3■■□□□ 1.8
CDKN2A-208ENST00000498124 IFIT1BQ5T764 474 aaKnown RBP26.3■■□□□ 1.8
CDKN2A-208ENST00000498124 GBF1Q92538 1859 aa26.3■■□□□ 1.8
CDKN2A-208ENST00000498124 KIAA1217Q5T5P2 1943 aa26.29■■□□□ 1.8
CDKN2A-208ENST00000498124 PPP1R11O60927 126 aaPredicted RBP26.29■■□□□ 1.8
CDKN2A-208ENST00000498124 CYP21A2P08686 494 aa26.29■■□□□ 1.8
CDKN2A-208ENST00000498124 TXNP10599 105 aaKnown RBP26.29■■□□□ 1.8
CDKN2A-208ENST00000498124 FBXO11Q86XK2 927 aa26.29■■□□□ 1.8
CDKN2A-208ENST00000498124 PPP1R13LQ8WUF5 828 aa26.29■■□□□ 1.8
CDKN2A-208ENST00000498124 MTMR8Q96EF0 704 aa26.29■■□□□ 1.8
CDKN2A-208ENST00000498124 VAT1LQ9HCJ6 419 aa26.29■■□□□ 1.8
CDKN2A-208ENST00000498124 MAD2L2Q9UI95 211 aa26.29■■□□□ 1.8
CDKN2A-208ENST00000498124 CYP2C9P11712 490 aa26.28■■□□□ 1.8
CDKN2A-208ENST00000498124 TTLL4Q14679 1199 aa26.28■■□□□ 1.8
CDKN2A-208ENST00000498124 NBPF20Q3BBV1 942 aa26.28■■□□□ 1.8
CDKN2A-208ENST00000498124 NSUN6Q8TEA1 469 aaKnown RBP26.28■■□□□ 1.8
CDKN2A-208ENST00000498124 SCLYQ96I15 445 aa26.28■■□□□ 1.8
CDKN2A-208ENST00000498124 ZNF576Q9H609 170 aa26.28■■□□□ 1.8
CDKN2A-208ENST00000498124 MRPL11Q9Y3B7 192 aaKnown RBP26.28■■□□□ 1.8
CDKN2A-208ENST00000498124 TANC1Q9C0D5 1861 aa26.28■■□□□ 1.8
CDKN2A-208ENST00000498124 B4DLN1 442 aa26.27■■□□□ 1.8
CDKN2A-208ENST00000498124 DHX16O60231 1041 aaKnown RBP26.27■■□□□ 1.8
CDKN2A-208ENST00000498124 MRPL12P52815 198 aaKnown RBP26.27■■□□□ 1.8
CDKN2A-208ENST00000498124 GHRHRQ02643 423 aa26.27■■□□□ 1.8
CDKN2A-208ENST00000498124 ARHGAP1Q07960 439 aa26.27■■□□□ 1.8
CDKN2A-208ENST00000498124 MCF2L2Q86YR7 1114 aa26.27■■□□□ 1.8
CDKN2A-208ENST00000498124 RMDN3Q96TC7 470 aa26.27■■□□□ 1.8
CDKN2A-208ENST00000498124 SENP2Q9HC62 589 aa26.27■■□□□ 1.8
CDKN2A-208ENST00000498124 SCN5AQ14524 2016 aa26.26■■□□□ 1.79
CDKN2A-208ENST00000498124 PALM3A6NDB9 673 aaPredicted RBP26.26■■□□□ 1.79
CDKN2A-208ENST00000498124 FGBP02675 491 aa26.26■■□□□ 1.79
CDKN2A-208ENST00000498124 OTOP2Q7RTS6 562 aa26.26■■□□□ 1.79
CDKN2A-208ENST00000498124 KLRF2D3W0D1 207 aa26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 KPNA6O60684 536 aa26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 HSD17B4P51659 736 aa26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 BRDTQ58F21 947 aaPredicted RBP26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 NFRKBQ6P4R8 1299 aa26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 CASC1Q6TDU7 716 aa26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 SEPT14Q6ZU15 432 aa26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 STOX1Q6ZVD7 989 aa26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 IWS1Q96ST2 819 aa26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 AMNQ9BXJ7 453 aa26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 COL25A1Q9BXS0 654 aaPredicted RBP26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 GPHNQ9NQX3 736 aaPredicted RBP26.25■■□□□ 1.79
CDKN2A-208ENST00000498124 SGSM2O43147 1006 aa26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 CDC45O75419 566 aa26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 MMP3P08254 477 aa26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 SUPT20HL2P0C7V6 817 aa26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 EIF2AK2P19525 551 aaKnown RBP26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 GRM4Q14833 912 aa26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 LY6KQ17RY6 165 aa26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 AFG1LQ8WV93 481 aa26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 PXMP2Q9NR77 195 aa26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 GTF3C3Q9Y5Q9 886 aa26.24■■□□□ 1.79
CDKN2A-208ENST00000498124 ZBTB5O15062 677 aa26.23■■□□□ 1.79
CDKN2A-208ENST00000498124 STXBP2Q15833 593 aa26.23■■□□□ 1.79
CDKN2A-208ENST00000498124 FAM47CQ5HY64 1035 aa26.23■■□□□ 1.79
CDKN2A-208ENST00000498124 YBX2Q9Y2T7 364 aaKnown RBP26.23■■□□□ 1.79
CDKN2A-208ENST00000498124 U3KPZ7 1027 aaPredicted RBP26.23■■□□□ 1.79
CDKN2A-208ENST00000498124 CFBP00751 764 aa26.22■■□□□ 1.79
CDKN2A-208ENST00000498124 GH1P01241 217 aa26.22■■□□□ 1.79
CDKN2A-208ENST00000498124 ARHGEF16Q5VV41 709 aa26.22■■□□□ 1.79
CDKN2A-208ENST00000498124 USP38Q8NB14 1042 aa26.22■■□□□ 1.79
CDKN2A-208ENST00000498124 KAT2BQ92831 832 aa26.22■■□□□ 1.79
CDKN2A-208ENST00000498124 CTAGE1Q96RT6 745 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms