RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 K7ESM1 405 aa6.83□□□□□ -1.32
SMC4-227ENST00000497984 CNR2P34972 360 aa6.83□□□□□ -1.32
SMC4-227ENST00000497984 ZXDCQ2QGD7 858 aaPredicted RBP6.83□□□□□ -1.32
SMC4-227ENST00000497984 TMCO4Q5TGY1 634 aa6.83□□□□□ -1.32
SMC4-227ENST00000497984 MBLAC2Q68D91 279 aa6.83□□□□□ -1.32
SMC4-227ENST00000497984 ZNF761Q86XN6 746 aaPredicted RBP6.83□□□□□ -1.32
SMC4-227ENST00000497984 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
SMC4-227ENST00000497984 PLEKHO2Q8TD55 490 aa6.83□□□□□ -1.32
SMC4-227ENST00000497984 DDX1Q92499 740 aaKnown RBP6.83□□□□□ -1.32
SMC4-227ENST00000497984 NTMQ9P121 344 aa6.83□□□□□ -1.32
SMC4-227ENST00000497984 TRBV23OR9-2A0A075B6M9 112 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 NPHS1O60500 1241 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 NTRK1P04629 796 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 C8BP07358 591 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 GJA8P48165 433 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 SARSP49591 514 aaKnown RBP6.82□□□□□ -1.32
SMC4-227ENST00000497984 CASP7P55210 303 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 DPF3Q92784 378 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 COPS5Q92905 334 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 ZBTB8AQ96BR9 441 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 DDX11Q96FC9 970 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 SUGT1Q9Y2Z0 365 aa6.82□□□□□ -1.32
SMC4-227ENST00000497984 GJA9P57773 515 aa6.81□□□□□ -1.32
SMC4-227ENST00000497984 KIAA1211LQ6NV74 962 aa6.81□□□□□ -1.32
SMC4-227ENST00000497984 RBM15Q96T37 977 aaKnown RBP eCLIP6.81□□□□□ -1.325e-67■■■■■ 212.6
SMC4-227ENST00000497984 MMP19Q99542 508 aa6.81□□□□□ -1.32
SMC4-227ENST00000497984 GORASP1Q9BQQ3 440 aa6.81□□□□□ -1.32
SMC4-227ENST00000497984 CLEC1BQ9P126 229 aa6.81□□□□□ -1.32
SMC4-227ENST00000497984 EMC9Q9Y3B6 208 aa6.81□□□□□ -1.32
SMC4-227ENST00000497984 ANKRD34BA5PLL1 514 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 FUCA1P04066 466 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 ITGB3P05106 788 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 PLS3P13797 630 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 INSRRP14616 1297 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 NASPP49321 788 aaPredicted RBP6.8□□□□□ -1.32
SMC4-227ENST00000497984 SMAD4Q13485 552 aaKnown RBP6.8□□□□□ -1.32
SMC4-227ENST00000497984 PPP2R5EQ16537 467 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 VHLLQ6RSH7 139 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 FAM169BQ8N8A8 192 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 USP33Q8TEY7 942 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 SYT3Q9BQG1 590 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 GPRC5CQ9NQ84 441 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 AKT3Q9Y243 479 aa6.8□□□□□ -1.32
SMC4-227ENST00000497984 KCNH1O95259 989 aa6.79□□□□□ -1.32
SMC4-227ENST00000497984 CYP2C8P10632 490 aa6.79□□□□□ -1.32
SMC4-227ENST00000497984 CYP4F3Q08477 520 aa6.79□□□□□ -1.32
SMC4-227ENST00000497984 SCRN1Q12765 414 aa6.79□□□□□ -1.32
SMC4-227ENST00000497984 ZNF827Q17R98 1081 aa6.79□□□□□ -1.32
SMC4-227ENST00000497984 ADAMTS17Q8TE56 1095 aa6.79□□□□□ -1.32
SMC4-227ENST00000497984 MYRFQ9Y2G1 1151 aa6.79□□□□□ -1.32
SMC4-227ENST00000497984 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.79□□□□□ -1.32
SMC4-227ENST00000497984 SGSM2O43147 1006 aa6.78□□□□□ -1.32
SMC4-227ENST00000497984 THBS2P35442 1172 aa6.78□□□□□ -1.32
SMC4-227ENST00000497984 MAGEA10P43363 369 aaPredicted RBP6.78□□□□□ -1.32
SMC4-227ENST00000497984 INF2Q27J81 1249 aa6.78□□□□□ -1.32
SMC4-227ENST00000497984 TTLL7Q6ZT98 887 aa6.78□□□□□ -1.32
SMC4-227ENST00000497984 MIB1Q86YT6 1006 aa6.78□□□□□ -1.32
SMC4-227ENST00000497984 DCP2Q8IU60 420 aaKnown RBP6.78□□□□□ -1.32
SMC4-227ENST00000497984 C11orf84Q9BUA3 381 aaPredicted RBP6.78□□□□□ -1.32
SMC4-227ENST00000497984 MARCH2Q9P0N8 246 aa6.78□□□□□ -1.32
SMC4-227ENST00000497984 THBDP07204 575 aa6.77□□□□□ -1.33
SMC4-227ENST00000497984 MFAP1P55081 439 aaKnown RBP6.77□□□□□ -1.33
SMC4-227ENST00000497984 ADAM17P78536 824 aa6.77□□□□□ -1.33
SMC4-227ENST00000497984 RBM10P98175 930 aaKnown RBP6.77□□□□□ -1.33
SMC4-227ENST00000497984 HDLBPQ00341 1268 aaKnown RBP6.77□□□□□ -1.33
SMC4-227ENST00000497984 NT5DC4Q86YG4 428 aa6.77□□□□□ -1.33
SMC4-227ENST00000497984 FAM26EQ8N5C1 309 aa6.77□□□□□ -1.33
SMC4-227ENST00000497984 BVESQ8NE79 360 aa6.77□□□□□ -1.33
SMC4-227ENST00000497984 TMPRSS5Q9H3S3 457 aa6.77□□□□□ -1.33
SMC4-227ENST00000497984 SMARCA5O60264 1052 aaPredicted RBP6.76□□□□□ -1.33
SMC4-227ENST00000497984 RPL13P26373 211 aaKnown RBP6.76□□□□□ -1.33
SMC4-227ENST00000497984 KRTAP1-1Q07627 177 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 PUM1Q14671 1186 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMC4-227ENST00000497984 GTF2IRD2BQ6EKJ0 949 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 ETV3LQ6ZN32 361 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 GTF2IRD2Q86UP8 949 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 TEX2Q8IWB9 1127 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 TRIM59Q8IWR1 403 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 KYQ8NBH2 561 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 NPLOC4Q8TAT6 608 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 FRS2Q8WU20 508 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 MRGPRX3Q96LB0 322 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 GPR20Q99678 358 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
SMC4-227ENST00000497984 ZNF143P52747 638 aaPredicted RBP6.75□□□□□ -1.33
SMC4-227ENST00000497984 PRR31Q5SQ13 230 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 POMZP3Q6PJE2 187 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
SMC4-227ENST00000497984 SEC16BQ96JE7 1060 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 APBA2Q99767 749 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 LGR4Q9BXB1 951 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 AP5M1Q9H0R1 490 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 NKX2-4Q9H2Z4 354 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 PCDH18Q9HCL0 1135 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 CYP26B1Q9NR63 512 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 SMPD4Q9NXE4 827 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 PALD1Q9ULE6 856 aa6.75□□□□□ -1.33
SMC4-227ENST00000497984 C22orf46C9J442 243 aa6.74□□□□□ -1.33
SMC4-227ENST00000497984 ARNTLO00327 626 aa6.74□□□□□ -1.33
SMC4-227ENST00000497984 SLC6A11P48066 632 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms