RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 CTGFP29279 349 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 LRIT3Q3SXY7 679 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 XKR5Q6UX68 686 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 KSR2Q6VAB6 950 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 UBE3BQ7Z3V4 1068 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 ANKRD23Q86SG2 305 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
VPS45-210ENST00000497638 SLC7A3Q8WY07 619 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 PMEPA1Q969W9 287 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 HOOK2Q96ED9 719 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 GDF15Q99988 308 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 TMEM39BQ9GZU3 492 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 TDRD3Q9H7E2 651 aaKnown RBP9.65□□□□□ -0.86
VPS45-210ENST00000497638 MTMR10Q9NXD2 777 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 CPA4Q9UI42 421 aa9.65□□□□□ -0.86
VPS45-210ENST00000497638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.65□□□□□ -0.86
VPS45-210ENST00000497638 FAM205AQ6ZU69 1335 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.64□□□□□ -0.87
VPS45-210ENST00000497638 TCP10L2B9ZVM9 353 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 TM4SF5O14894 197 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 ADAM11O75078 769 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 PDGFAP04085 211 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 FCGRTP55899 365 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 PRKCZQ05513 592 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 AAMPQ13685 434 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS45-210ENST00000497638 WRNIP1Q96S55 665 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
VPS45-210ENST00000497638 A0A1B0GUL6 1792 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 ALPK3Q96L96 1907 aa9.64□□□□□ -0.87
VPS45-210ENST00000497638 PI4KAP2A4QPH2 592 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 PDHXO00330 501 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 PDE2AO00408 941 aaPredicted RBP9.63□□□□□ -0.87
VPS45-210ENST00000497638 TGFB1P01137 390 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 CSF1RP07333 972 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 ZNF853P0CG23 659 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 MPSTP25325 297 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 MZF1P28698 734 aaPredicted RBP9.63□□□□□ -0.87
VPS45-210ENST00000497638 ARL4DP49703 201 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 PPATQ06203 517 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 MFSD14BQ5SR56 506 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 CCDC30Q5VVM6 783 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 Q7L0L9 218 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 CCDC146Q8IYE0 955 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 PI4KAP1Q8N8J0 262 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 WNT8BQ93098 351 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 RUNDC1Q96C34 613 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 FAM46AQ96IP4 442 aaKnown RBP9.63□□□□□ -0.87
VPS45-210ENST00000497638 PARK7Q99497 189 aaKnown RBP9.63□□□□□ -0.87
VPS45-210ENST00000497638 OSGEPQ9NPF4 335 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 DZANK1Q9NVP4 752 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 JAG2Q9Y219 1238 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 VCANP13611 3396 aa9.63□□□□□ -0.87
VPS45-210ENST00000497638 RPAP1Q9BWH6 1393 aaPredicted RBP9.63□□□□□ -0.87
VPS45-210ENST00000497638 MGAMO43451 1857 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 ANKRD18BA2A2Z9 1011 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 SNAP23O00161 211 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 ADCY3O60266 1144 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 COBLO75128 1261 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 TAF5LO75529 589 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 TFRCP02786 760 aaKnown RBP9.62□□□□□ -0.87
VPS45-210ENST00000497638 EIF1AXP47813 144 aaKnown RBP9.62□□□□□ -0.87
VPS45-210ENST00000497638 CD97P48960 835 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 NLRP12P59046 1061 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 GNAI1P63096 354 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 NFIAQ12857 509 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 CWF19L2Q2TBE0 894 aaKnown RBP9.62□□□□□ -0.87
VPS45-210ENST00000497638 DCAF15Q66K64 600 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 NECAB2Q7Z6G3 386 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 TRIM42Q8IWZ5 723 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 TDHQ8IZJ6 230 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.62□□□□□ -0.87
VPS45-210ENST00000497638 GTF3C2Q8WUA4 911 aaPredicted RBP9.62□□□□□ -0.87
VPS45-210ENST00000497638 ZKSCAN4Q969J2 545 aaPredicted RBP9.62□□□□□ -0.87
VPS45-210ENST00000497638 MYRFLQ96LU7 910 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 DEFB118Q96PH6 123 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 KCNF1Q9H3M0 494 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 C7orf69Q9H7B7 122 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 PAK6Q9NQU5 681 aaPredicted RBP9.62□□□□□ -0.87
VPS45-210ENST00000497638 IFT57Q9NWB7 429 aa9.62□□□□□ -0.87
VPS45-210ENST00000497638 HMX2A2RU54 273 aa9.61□□□□□ -0.87
VPS45-210ENST00000497638 ELL2O00472 640 aaPredicted RBP9.61□□□□□ -0.87
VPS45-210ENST00000497638 CRKP46108 304 aa9.61□□□□□ -0.87
VPS45-210ENST00000497638 HDLBPQ00341 1268 aaKnown RBP9.61□□□□□ -0.87
VPS45-210ENST00000497638 CALD1Q05682 793 aaKnown RBP9.61□□□□□ -0.87
VPS45-210ENST00000497638 FKBP1CQ5VVH2 108 aa9.61□□□□□ -0.87
VPS45-210ENST00000497638 ALKBH2Q6NS38 261 aa9.61□□□□□ -0.87
VPS45-210ENST00000497638 FAM83AQ86UY5 434 aa9.61□□□□□ -0.87
VPS45-210ENST00000497638 C7orf61Q8IZ16 206 aa9.61□□□□□ -0.87
VPS45-210ENST00000497638 PAWRQ96IZ0 340 aaKnown RBP9.61□□□□□ -0.87
VPS45-210ENST00000497638 ZNF341Q9BYN7 854 aa9.61□□□□□ -0.87
VPS45-210ENST00000497638 TMOD2Q9NZR1 351 aa9.61□□□□□ -0.87
VPS45-210ENST00000497638 RPTORQ8N122 1335 aa9.6□□□□□ -0.87
VPS45-210ENST00000497638 KRTAP9-6A0A140TA67 174 aa9.6□□□□□ -0.87
VPS45-210ENST00000497638 CASP7P55210 303 aa9.6□□□□□ -0.87
VPS45-210ENST00000497638 IFIT5Q13325 482 aaKnown RBP9.6□□□□□ -0.87
VPS45-210ENST00000497638 GCKRQ14397 625 aa9.6□□□□□ -0.87
VPS45-210ENST00000497638 ANKRD34AQ69YU3 496 aa9.6□□□□□ -0.87
VPS45-210ENST00000497638 TDRD7Q8NHU6 1098 aaKnown RBP9.6□□□□□ -0.87
VPS45-210ENST00000497638 HHIPQ96QV1 700 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms