RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 ZNF408Q9H9D4 720 aa13.78□□□□□ -0.2
HPS1-213ENST00000497527 AGTPBP1Q9UPW5 1226 aa13.78□□□□□ -0.2
HPS1-213ENST00000497527 STK24Q9Y6E0 443 aa13.78□□□□□ -0.2
HPS1-213ENST00000497527 SPDYE16A6NNV3 312 aaPredicted RBP13.77□□□□□ -0.21
HPS1-213ENST00000497527 TDP2O95551 362 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 HOXA13P31271 388 aaPredicted RBP13.77□□□□□ -0.21
HPS1-213ENST00000497527 GRIN1Q05586 938 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 PDIA5Q14554 519 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 Q4G0T1 1027 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 SNRNP48Q6IEG0 339 aaKnown RBP13.77□□□□□ -0.21
HPS1-213ENST00000497527 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 MOB2Q70IA6 237 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 FCHSD1Q86WN1 690 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 CEP57L1Q8IYX8 460 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 IQUBQ8NA54 791 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 CHST13Q8NET6 341 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 REPS2Q8NFH8 660 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 RASSF8Q8NHQ8 419 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 MTMR9Q96QG7 549 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 RNF146Q9NTX7 359 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
HPS1-213ENST00000497527 FBXO40Q9UH90 709 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 PNMA3Q9UL41 463 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 MRVI1Q9Y6F6 885 aa13.77□□□□□ -0.21
HPS1-213ENST00000497527 TRAF5O00463 557 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 POLR2DO15514 142 aaKnown RBP13.76□□□□□ -0.21
HPS1-213ENST00000497527 STAT3P40763 770 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 GTF2A2P52657 109 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 SETQ01105 290 aaPredicted RBP13.76□□□□□ -0.21
HPS1-213ENST00000497527 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 RNF207Q6ZRF8 634 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 CALML4Q96GE6 196 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 FAM20AQ96MK3 541 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 CUEDC2Q9H467 287 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 ACAD9Q9H845 621 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 NMRK2Q9NPI5 230 aa13.76□□□□□ -0.21
HPS1-213ENST00000497527 ZNF214Q9UL59 606 aaPredicted RBP13.76□□□□□ -0.21
HPS1-213ENST00000497527 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 CELF2O95319 508 aaKnown RBP13.75□□□□□ -0.21
HPS1-213ENST00000497527 ZBTB48P10074 688 aaPredicted RBP13.75□□□□□ -0.21
HPS1-213ENST00000497527 CETPP11597 493 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 TXKP42681 527 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 STX1AQ16623 288 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 TREML2Q5T2D2 321 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 CKAP2LQ8IYA6 745 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 IGSF22Q8N9C0 903 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 EPSTI1Q96J88 318 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 WNK4Q96J92 1243 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 FUCA2Q9BTY2 467 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 KCNMB3Q9NPA1 279 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 ANO10Q9NW15 660 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 PCDHA12Q9UN75 941 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 SLC45A1Q9Y2W3 748 aa13.75□□□□□ -0.21
HPS1-213ENST00000497527 RPTORQ8N122 1335 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 NFIBO00712 420 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 SLC37A4O43826 429 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 SMC2O95347 1197 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 SLFN14P0C7P3 912 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 TAL1P17542 331 aaPredicted RBP13.74□□□□□ -0.21
HPS1-213ENST00000497527 TYRO3Q06418 890 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 TMEM132BQ14DG7 1078 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 IL17AQ16552 155 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 KRT79Q5XKE5 535 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 XRRA1Q6P2D8 792 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 CABP7Q86V35 215 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 RIOX2Q8IUF8 465 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 SYTL5Q8TDW5 730 aaPredicted RBP13.74□□□□□ -0.21
HPS1-213ENST00000497527 CDK5RAP3Q96JB5 506 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 TTC12Q9H892 705 aaPredicted RBP13.74□□□□□ -0.21
HPS1-213ENST00000497527 DISC1Q9NRI5 854 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 HOMER2Q9NSB8 354 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 KIAA1468Q9P260 1216 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 LRWD1Q9UFC0 647 aa13.74□□□□□ -0.21
HPS1-213ENST00000497527 PFASO15067 1338 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 KDM3AQ9Y4C1 1321 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 EDIL3O43854 480 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 SLC25A27O95847 323 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 MYL1P05976 194 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 STAT6P42226 847 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 TECP42680 631 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 HERVK_113P62684 666 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 RPS6P62753 249 aaKnown RBP13.73□□□□□ -0.21
HPS1-213ENST00000497527 PLS1Q14651 629 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 POSTNQ15063 836 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 LONRF3Q496Y0 759 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 PRR16Q569H4 304 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 MUM1L1Q5H9M0 696 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 RRAGBQ5VZM2 374 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 NSMFQ6X4W1 530 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 USP49Q70CQ1 688 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 NIPA1Q7RTP0 329 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 GAS2L3Q86XJ1 694 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 PDILTQ8N807 584 aa13.73□□□□□ -0.21
HPS1-213ENST00000497527 ERMNQ8TAM6 284 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms