RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 DCAF4Q8WV16 495 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 CDK5RAP3Q96JB5 506 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 TMEM87BQ96K49 555 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 CCDC74BQ96LY2 380 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 TEKT5Q96M29 485 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 CORO1BQ9BR76 489 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.35□□□□□ -1.23
BRCA1-224ENST00000497488 DISC1Q9NRI5 854 aa7.35□□□□□ -1.23
BRCA1-224ENST00000497488 DNAJB12Q9NXW2 375 aaKnown RBP7.35□□□□□ -1.23
BRCA1-224ENST00000497488 CGGBP1Q9UFW8 167 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-224ENST00000497488 SMARCA4P51532 1647 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 FAM177BA6PVY3 158 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 SHOXO15266 292 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 ANP32CO43423 234 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 SNX2O60749 519 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 PQBP1O60828 265 aaKnown RBP7.34□□□□□ -1.23
BRCA1-224ENST00000497488 SCG5P05408 212 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 NEFMP07197 916 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 SNRPB2P08579 225 aaKnown RBP7.34□□□□□ -1.23
BRCA1-224ENST00000497488 HSD3B1P14060 373 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 EPHA1P21709 976 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 GBP1P32455 592 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 CABP4P57796 275 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 RING1Q06587 406 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 CCDC96Q2M329 555 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 C6orf118Q5T5N4 469 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 CFAP161Q6P656 301 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 MRPL41Q8IXM3 137 aaKnown RBP7.34□□□□□ -1.23
BRCA1-224ENST00000497488 FAM156AQ8NDB6 213 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 CXorf38Q8TB03 319 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 DEPTORQ8TB45 409 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 ACO2Q99798 780 aaKnown RBP7.34□□□□□ -1.23
BRCA1-224ENST00000497488 EIF2AK1Q9BQI3 630 aaKnown RBP7.34□□□□□ -1.23
BRCA1-224ENST00000497488 ISCA1Q9BUE6 129 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 WDR12Q9GZL7 423 aaKnown RBP7.34□□□□□ -1.23
BRCA1-224ENST00000497488 NRSN2Q9GZP1 204 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 NKX2-4Q9H2Z4 354 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 SMOC1Q9H4F8 434 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 NDFIP2Q9NV92 336 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 TRIM33Q9UPN9 1127 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 ZNF652Q9Y2D9 606 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 PCDHA8Q9Y5H6 950 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 CSADQ9Y600 493 aa7.34□□□□□ -1.23
BRCA1-224ENST00000497488 hCG_1642624A0A1W2PR95 340 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 J3KRW8 73 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 ARVCFO00192 962 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 DDX3YO15523 660 aaKnown RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 BNIP3LO60238 219 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 H2AFYO75367 372 aaKnown RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 VDRP11473 427 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 ITGA4P13612 1032 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 CD33P20138 364 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 RRM1P23921 792 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 CHKAP35790 457 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 HNRNPUQ00839 825 aaKnown RBP eCLIP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 BTKQ06187 659 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 POU4F3Q15319 338 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 DDB1Q16531 1140 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 PRSS53Q2L4Q9 553 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 KIF4BQ2VIQ3 1234 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 ZC3H12AQ5D1E8 599 aaKnown RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 ATAT1Q5SQI0 421 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 SLC6A19Q695T7 634 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 CC2D1AQ6P1N0 951 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 KCNT2Q6UVM3 1135 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 RSRC2Q7L4I2 434 aaKnown RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 OTOP3Q7RTS5 596 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 MTDHQ86UE4 582 aaKnown RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 CRIPAKQ8N1N5 446 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 CHST14Q8NCH0 376 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 BAHD1Q8TBE0 780 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 MKRN2Q9H000 416 aaKnown RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 IGFLR1Q9H665 355 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 GP6Q9HCN6 339 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 NOL7Q9UMY1 257 aaKnown RBP7.33□□□□□ -1.24
BRCA1-224ENST00000497488 GPR52Q9Y2T5 361 aa7.33□□□□□ -1.24
BRCA1-224ENST00000497488 FIGNL2A6NMB9 653 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 RASA4BC9J798 803 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 RASA4O43374 803 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 FIBPO43427 364 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 CPP00450 1065 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 MAPK9P45984 424 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 MECP2P51608 486 aaKnown RBP7.32□□□□□ -1.24
BRCA1-224ENST00000497488 SCAND1P57086 179 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 FAM193AP78312 1265 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 SEMA5AQ13591 1074 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 LLGL1Q15334 1064 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 TMEM177Q53S58 311 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 BROXQ5VW32 411 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 PDXDC1Q6P996 788 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 CCDC149Q6ZUS6 474 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 OVCH2Q7RTZ1 564 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 RASSF3Q86WH2 238 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 ZC3H7AQ8IWR0 971 aaKnown RBP7.32□□□□□ -1.24
BRCA1-224ENST00000497488 TRIM22Q8IYM9 498 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 C7orf61Q8IZ16 206 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 DIS3LQ8TF46 1054 aaKnown RBP7.32□□□□□ -1.24
BRCA1-224ENST00000497488 GCC1Q96CN9 775 aa7.32□□□□□ -1.24
BRCA1-224ENST00000497488 WDR89Q96FK6 387 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms