RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	CHST3	Q7LGC8	479 aa		28.83	■■■□□ 2.21
HDAC10-219	ENST00000497483	DEFB123	Q8N688	67 aa		28.83	■■■□□ 2.21
HDAC10-219	ENST00000497483	OR6J1	Q8NGC5	347 aa		28.83	■■■□□ 2.21
HDAC10-219	ENST00000497483	TAAR1	Q96RJ0	339 aa		28.83	■■■□□ 2.21
HDAC10-219	ENST00000497483	GRIN2D	O15399	1336 aa		28.83	■■■□□ 2.21
HDAC10-219	ENST00000497483	EPHB4	P54760	987 aa		28.82	■■■□□ 2.2
HDAC10-219	ENST00000497483	TRAF1	Q13077	416 aa		28.82	■■■□□ 2.2
HDAC10-219	ENST00000497483	TTLL4	Q14679	1199 aa		28.82	■■■□□ 2.2
HDAC10-219	ENST00000497483	FAM109B	Q6ICB4	259 aa	Predicted RBP	28.82	■■■□□ 2.2
HDAC10-219	ENST00000497483	MFSD5	Q6N075	450 aa		28.82	■■■□□ 2.2
HDAC10-219	ENST00000497483	CATIP	Q7Z7H3	387 aa		28.82	■■■□□ 2.2
HDAC10-219	ENST00000497483	SAMD3	Q8N6K7	520 aa		28.82	■■■□□ 2.2
HDAC10-219	ENST00000497483	RMDN3	Q96TC7	470 aa		28.82	■■■□□ 2.2
HDAC10-219	ENST00000497483	MAP3K14	Q99558	947 aa		28.82	■■■□□ 2.2
HDAC10-219	ENST00000497483	PURA	Q00577	322 aa	Known RBP	28.81	■■■□□ 2.2
HDAC10-219	ENST00000497483	PCDHA1	Q9Y5I3	950 aa		28.81	■■■□□ 2.2
HDAC10-219	ENST00000497483	CYTH3	O43739	400 aa		28.8	■■■□□ 2.2
HDAC10-219	ENST00000497483	CFB	P00751	764 aa		28.8	■■■□□ 2.2
HDAC10-219	ENST00000497483	TXN	P10599	105 aa	Known RBP	28.8	■■■□□ 2.2
HDAC10-219	ENST00000497483	BRDT	Q58F21	947 aa	Predicted RBP	28.8	■■■□□ 2.2
HDAC10-219	ENST00000497483	CCDC62	Q6P9F0	684 aa		28.8	■■■□□ 2.2
HDAC10-219	ENST00000497483		Q7L0L9	218 aa		28.8	■■■□□ 2.2
HDAC10-219	ENST00000497483	LY9	Q9HBG7	655 aa		28.8	■■■□□ 2.2
HDAC10-219	ENST00000497483		A6NJR5	290 aa		28.79	■■■□□ 2.2
HDAC10-219	ENST00000497483	SLC27A2	O14975	620 aa		28.79	■■■□□ 2.2
HDAC10-219	ENST00000497483	DDAH1	O94760	285 aa		28.79	■■■□□ 2.2
HDAC10-219	ENST00000497483	ARIH2	O95376	493 aa		28.79	■■■□□ 2.2
HDAC10-219	ENST00000497483	NECTIN1	Q15223	517 aa		28.79	■■■□□ 2.2
HDAC10-219	ENST00000497483	STXBP2	Q15833	593 aa		28.79	■■■□□ 2.2
HDAC10-219	ENST00000497483	PIGS	Q96S52	555 aa		28.79	■■■□□ 2.2
HDAC10-219	ENST00000497483	PXMP2	Q9NR77	195 aa		28.79	■■■□□ 2.2
HDAC10-219	ENST00000497483	MCM5	P33992	734 aa		28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	PSMC6	P62333	389 aa		28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	SMAD3	P84022	425 aa	Known RBP	28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	PPIG	Q13427	754 aa	Known RBP eCLIP	28.78	■■■□□ 2.2	3e-11	■■■■□ 24.2
HDAC10-219	ENST00000497483	ARHGEF16	Q5VV41	709 aa		28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	CASC1	Q6TDU7	716 aa		28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	HOMER1	Q86YM7	354 aa		28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	TMEM87B	Q96K49	555 aa		28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	RNPC3	Q96LT9	517 aa	Known RBP	28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	MTG1	Q9BT17	334 aa	Predicted RBP	28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	ANO2	Q9NQ90	1003 aa		28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	MTMR10	Q9NXD2	777 aa		28.78	■■■□□ 2.2
HDAC10-219	ENST00000497483	PRC1	O43663	620 aa		28.77	■■■□□ 2.2
HDAC10-219	ENST00000497483	B4GALT4	O60513	344 aa		28.77	■■■□□ 2.2
HDAC10-219	ENST00000497483	KPNA6	O60684	536 aa		28.77	■■■□□ 2.2
HDAC10-219	ENST00000497483	CREB3L3	Q68CJ9	461 aa		28.77	■■■□□ 2.2
HDAC10-219	ENST00000497483	ZNF654	Q8IZM8	581 aa		28.77	■■■□□ 2.2
HDAC10-219	ENST00000497483	TMEM199	Q8N511	208 aa		28.77	■■■□□ 2.2
HDAC10-219	ENST00000497483	COPS5	Q92905	334 aa		28.77	■■■□□ 2.2
HDAC10-219	ENST00000497483	PNMA6F	A0A0J9YX94	578 aa		28.76	■■■□□ 2.19
HDAC10-219	ENST00000497483	EIF2AK2	P19525	551 aa	Known RBP	28.76	■■■□□ 2.19
HDAC10-219	ENST00000497483	SKAP1	Q86WV1	359 aa		28.76	■■■□□ 2.19
HDAC10-219	ENST00000497483	SPZ1	Q9BXG8	430 aa		28.76	■■■□□ 2.19
HDAC10-219	ENST00000497483	PPP1R12C	Q9BZL4	782 aa		28.76	■■■□□ 2.19
HDAC10-219	ENST00000497483	COL6A3	P12111	3177 aa		28.76	■■■□□ 2.19
HDAC10-219	ENST00000497483	SH2B2	O14492	632 aa	Predicted RBP	28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	EIF3J	O75822	258 aa	Known RBP	28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	NR3C2	P08235	984 aa		28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	MYL3	P08590	195 aa		28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	KIF5B	P33176	963 aa		28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	TMTC2	Q8N394	836 aa		28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	CTCFL	Q8NI51	663 aa	Predicted RBP	28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	GPHN	Q9NQX3	736 aa	Predicted RBP	28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	MYH7B	A7E2Y1	1941 aa		28.75	■■■□□ 2.19
HDAC10-219	ENST00000497483	TANC1	Q9C0D5	1861 aa		28.74	■■■□□ 2.19
HDAC10-219	ENST00000497483	SMARCA1	P28370	1054 aa		28.74	■■■□□ 2.19
HDAC10-219	ENST00000497483	LIFR	P42702	1097 aa		28.74	■■■□□ 2.19
HDAC10-219	ENST00000497483	SEPT14	Q6ZU15	432 aa		28.74	■■■□□ 2.19
HDAC10-219	ENST00000497483	PDCD2L	Q9BRP1	358 aa		28.74	■■■□□ 2.19
HDAC10-219	ENST00000497483	HIPK3	Q9H422	1215 aa		28.74	■■■□□ 2.19
HDAC10-219	ENST00000497483	GH1	P01241	217 aa		28.73	■■■□□ 2.19
HDAC10-219	ENST00000497483	CSF2RA	P15509	400 aa		28.73	■■■□□ 2.19
HDAC10-219	ENST00000497483	ARHGAP1	Q07960	439 aa		28.73	■■■□□ 2.19
HDAC10-219	ENST00000497483	ZNF697	Q5TEC3	545 aa		28.73	■■■□□ 2.19
HDAC10-219	ENST00000497483	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	28.73	■■■□□ 2.19
HDAC10-219	ENST00000497483	NOC4L	Q9BVI4	516 aa	Known RBP	28.73	■■■□□ 2.19
HDAC10-219	ENST00000497483	TRPV6	Q9H1D0	765 aa		28.73	■■■□□ 2.19
HDAC10-219	ENST00000497483	STXBP5L	Q9Y2K9	1186 aa		28.73	■■■□□ 2.19
HDAC10-219	ENST00000497483	GCOM1	H8Y6P7	765 aa	Predicted RBP	28.72	■■■□□ 2.19
HDAC10-219	ENST00000497483	POLR2M	P0CAP2	368 aa		28.72	■■■□□ 2.19
HDAC10-219	ENST00000497483	CYP2C18	P33260	490 aa		28.72	■■■□□ 2.19
HDAC10-219	ENST00000497483	PSRC1	Q6PGN9	363 aa	Predicted RBP	28.72	■■■□□ 2.19
HDAC10-219	ENST00000497483	EMID1	Q96A84	441 aa	Predicted RBP	28.72	■■■□□ 2.19
HDAC10-219	ENST00000497483	LZTS2	Q9BRK4	669 aa		28.72	■■■□□ 2.19
HDAC10-219	ENST00000497483	MYL10	Q9BUA6	226 aa		28.72	■■■□□ 2.19
HDAC10-219	ENST00000497483	MMP3	P08254	477 aa		28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	SUPT20HL2	P0C7V6	817 aa		28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	HOXA13	P31271	388 aa	Predicted RBP	28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	COL9A3	Q14050	684 aa	Predicted RBP	28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	PGM5	Q15124	567 aa		28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	LY6K	Q17RY6	165 aa		28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	TMEM240	Q5SV17	173 aa		28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	RNF20	Q5VTR2	975 aa		28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	NFRKB	Q6P4R8	1299 aa		28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	C16orf59	Q7L2K0	433 aa		28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	DDX41	Q9UJV9	622 aa	Known RBP	28.71	■■■□□ 2.19
HDAC10-219	ENST00000497483	FRMPD4	Q14CM0	1322 aa		28.7	■■■□□ 2.19
HDAC10-219	ENST00000497483	UMODL1	Q5DID0	1318 aa		28.7	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms