RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 ZNF831Q5JPB2 1677 aa18.2■□□□□ 0.5
PCBP4-216ENST00000497390 AKR1B1P15121 316 aa18.2■□□□□ 0.5
PCBP4-216ENST00000497390 CAPN2P17655 700 aa18.2■□□□□ 0.5
PCBP4-216ENST00000497390 SLC16A2P36021 539 aa18.2■□□□□ 0.5
PCBP4-216ENST00000497390 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
PCBP4-216ENST00000497390 ZSCAN29Q8IWY8 852 aaPredicted RBP18.2■□□□□ 0.5
PCBP4-216ENST00000497390 COG1Q8WTW3 980 aa18.2■□□□□ 0.5
PCBP4-216ENST00000497390 NGLY1Q96IV0 654 aa18.2■□□□□ 0.5
PCBP4-216ENST00000497390 JADE2Q9NQC1 790 aa18.2■□□□□ 0.5
PCBP4-216ENST00000497390 MYH7BA7E2Y1 1941 aa18.2■□□□□ 0.5
PCBP4-216ENST00000497390 ERLIN1O75477 346 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 MOCS3O95396 460 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 GSTO1P78417 241 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 CACNB1Q02641 598 aaPredicted RBP18.19■□□□□ 0.5
PCBP4-216ENST00000497390 CALCRLQ16602 461 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 SOGA3Q5TF21 947 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 AK8Q96MA6 479 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 TBC1D7Q9P0N9 293 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 LCMT1Q9UIC8 334 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 SIK3Q9Y2K2 1263 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 MYL1P05976 194 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 GNA11P29992 359 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 TUBB2AQ13885 445 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 CENPPQ6IPU0 288 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 TMC4Q7Z404 712 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 TUBB2BQ9BVA1 445 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 MMRN2Q9H8L6 949 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 DDX4Q9NQI0 724 aaKnown RBP18.19■□□□□ 0.5
PCBP4-216ENST00000497390 LRRC4BQ9NT99 713 aa18.19■□□□□ 0.5
PCBP4-216ENST00000497390 EIF3CLB5ME19 914 aaKnown RBP18.18■□□□□ 0.5
PCBP4-216ENST00000497390 POTEB2H3BUK9 544 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 NCK2O43639 380 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 KRT86O43790 486 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 TNNI2P48788 182 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 IRX5P78411 483 aaPredicted RBP18.18■□□□□ 0.5
PCBP4-216ENST00000497390 ZSCAN26Q16670 478 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 KCTD19Q17RG1 926 aaPredicted RBP18.18■□□□□ 0.5
PCBP4-216ENST00000497390 CCDC96Q2M329 555 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 LARP4BQ92615 738 aaKnown RBP18.18■□□□□ 0.5
PCBP4-216ENST00000497390 ERGIC2Q96RQ1 377 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 EIF3CQ99613 913 aaKnown RBP18.18■□□□□ 0.5
PCBP4-216ENST00000497390 CALCOCO1Q9P1Z2 691 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 TAF1LQ8IZX4 1826 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 BICDL2A1A5D9 508 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 LRRC53A6NM62 1247 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 CYLC1P35663 651 aaPredicted RBP18.18■□□□□ 0.5
PCBP4-216ENST00000497390 EIF4A3P38919 411 aaKnown RBP18.18■□□□□ 0.5
PCBP4-216ENST00000497390 TNNT3P45378 269 aaPredicted RBP18.18■□□□□ 0.5
PCBP4-216ENST00000497390 FAM193AP78312 1265 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 KRT83P78385 493 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 RAD51AP2Q09MP3 1159 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 FKBP15Q5T1M5 1219 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 WDR93Q6P2C0 686 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 SV2BQ7L1I2 683 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 PURBQ96QR8 312 aaKnown RBP18.18■□□□□ 0.5
PCBP4-216ENST00000497390 NDST4Q9H3R1 872 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 PLEKHA4Q9H4M7 779 aa18.18■□□□□ 0.5
PCBP4-216ENST00000497390 ZC3H4Q9UPT8 1303 aaKnown RBP18.17■□□□□ 0.5
PCBP4-216ENST00000497390 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 VWA3BQ502W6 1294 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 DPP8Q6V1X1 898 aaPredicted RBP18.17■□□□□ 0.5
PCBP4-216ENST00000497390 DDX12PQ92771 950 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 CALML4Q96GE6 196 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 NPHP3-ACAD11A0A0J9YXS1 232 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 SYF2O95926 243 aaKnown RBP18.17■□□□□ 0.5
PCBP4-216ENST00000497390 LDHCP07864 332 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 RRAGAQ7L523 313 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 TXLNBQ8N3L3 684 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 CAGE1Q8TC20 777 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 SNX29Q8TEQ0 813 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 EXOC4Q96A65 974 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 CCDC42Q96M95 316 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 LZTS2Q9BRK4 669 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 CUEDC2Q9H467 287 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 ZNHIT6Q9NWK9 470 aaKnown RBP18.17■□□□□ 0.5
PCBP4-216ENST00000497390 DAGLAQ9Y4D2 1042 aa18.17■□□□□ 0.5
PCBP4-216ENST00000497390 ADAMTSL1Q8N6G6 1762 aa18.16■□□□□ 0.5
PCBP4-216ENST00000497390 MATR3P43243 847 aaKnown RBP eCLIP18.16■□□□□ 0.5
PCBP4-216ENST00000497390 VAV2P52735 878 aa18.16■□□□□ 0.5
PCBP4-216ENST00000497390 CNNM4Q6P4Q7 775 aa18.16■□□□□ 0.5
PCBP4-216ENST00000497390 LRRC55Q6ZSA7 311 aa18.16■□□□□ 0.5
PCBP4-216ENST00000497390 NOC3LQ8WTT2 800 aaKnown RBP18.16■□□□□ 0.5
PCBP4-216ENST00000497390 RPGRQ92834 1020 aaKnown RBP18.16■□□□□ 0.5
PCBP4-216ENST00000497390 MTMR4Q9NYA4 1195 aa18.16■□□□□ 0.5
PCBP4-216ENST00000497390 KIF11P52732 1056 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 GTF2IP78347 998 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 SLC7A5Q01650 507 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 GFPT1Q06210 699 aaPredicted RBP18.15■□□□□ 0.5
PCBP4-216ENST00000497390 TAF3Q5VWG9 929 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 CREG2Q8IUH2 290 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 IFIH1Q9BYX4 1025 aaKnown RBP18.15■□□□□ 0.5
PCBP4-216ENST00000497390 NLRC4Q9NPP4 1024 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 PLAGL2Q9UPG8 496 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 PCDHA13Q9Y5I0 950 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 HAS1Q92839 578 aa18.15■□□□□ 0.5
PCBP4-216ENST00000497390 SECISBP2LQ93073 1101 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms