RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 UMODL1Q5DID0 1318 aa19.72■□□□□ 0.75
TRAPPC3-207ENST00000497251 TXNP10599 105 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-207ENST00000497251 ATP2A2P16615 1042 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-207ENST00000497251 HAND2P61296 217 aa19.71■□□□□ 0.75
TRAPPC3-207ENST00000497251 NBPF20Q3BBV1 942 aa19.71■□□□□ 0.75
TRAPPC3-207ENST00000497251 ASPRV1Q53RT3 343 aa19.71■□□□□ 0.75
TRAPPC3-207ENST00000497251 NSUN6Q8TEA1 469 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-207ENST00000497251 DDX49Q9Y6V7 483 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-207ENST00000497251 LCTP09848 1927 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 MRPS5P82675 430 aaKnown RBP19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 TMEM63BQ5T3F8 832 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 TBC1D10CQ8IV04 446 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 SAMD3Q8N6K7 520 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 CCDC155Q8N6L0 562 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 USP38Q8NB14 1042 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 PNMA1Q8ND90 353 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 SLC9A7Q96T83 725 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 LNPKQ9C0E8 428 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 NKX2-4Q9H2Z4 354 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 KAT14Q9H8E8 782 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 CNNM2Q9H8M5 875 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 TRMT13Q9NUP7 481 aaKnown RBP19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 MAP3K20Q9NYL2 800 aaKnown RBP19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 CHD9Q3L8U1 2897 aa19.7■□□□□ 0.74
TRAPPC3-207ENST00000497251 SPTBN5Q9NRC6 3674 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 POU3F3P20264 500 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 FAM47CQ5HY64 1035 aa19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 PPP2R2DQ66LE6 453 aa19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 SESTD1Q86VW0 696 aa19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 CHD1LQ86WJ1 897 aa19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 CAGE1Q8TC20 777 aa19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 ASB2Q96Q27 587 aa19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 DSCC1Q9BVC3 393 aa19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 KRT23Q9C075 422 aa19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 DIAPH3Q9NSV4 1193 aa19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 MRPL11Q9Y3B7 192 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-207ENST00000497251 ZBBXA8MT70 800 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 KIF28PB7ZC32 967 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 TNFRSF10AO00220 468 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 BAIAP3O94812 1187 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 GH1P01241 217 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 CYP2C9P11712 490 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 CASTP20810 708 aaKnown RBP19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 PTGS1P23219 599 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 TRAF1Q13077 416 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 STXBP2Q15833 593 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 IMMTQ16891 758 aaKnown RBP19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 TMEM67Q5HYA8 995 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 CCDC62Q6P9F0 684 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 SCLYQ96I15 445 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 ZSCAN10Q96SZ4 725 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 NOD1Q9Y239 953 aa19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 YBX2Q9Y2T7 364 aaKnown RBP19.68■□□□□ 0.74
TRAPPC3-207ENST00000497251 IQCF3P0C7M6 154 aa19.67■□□□□ 0.74
TRAPPC3-207ENST00000497251 IGFBP4P22692 258 aa19.67■□□□□ 0.74
TRAPPC3-207ENST00000497251 ADGRE1Q14246 886 aa19.67■□□□□ 0.74
TRAPPC3-207ENST00000497251 CDC37Q16543 378 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC3-207ENST00000497251 AAK1Q2M2I8 961 aa19.67■□□□□ 0.74
TRAPPC3-207ENST00000497251 PLEKHM2Q8IWE5 1019 aa19.67■□□□□ 0.74
TRAPPC3-207ENST00000497251 EMID1Q96A84 441 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC3-207ENST00000497251 VWCEQ96DN2 955 aa19.67■□□□□ 0.74
TRAPPC3-207ENST00000497251 KDM4AO75164 1064 aa19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 EIF3JO75822 258 aaKnown RBP19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 PARP1P09874 1014 aaKnown RBP19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 NUCB1Q02818 461 aa19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 USH1GQ495M9 461 aa19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 ADGRF4Q8IZF3 695 aa19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 IL27Q8NEV9 243 aa19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 SYTL5Q8TDW5 730 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 AFAP1L1Q8TED9 768 aa19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 RMDN3Q96TC7 470 aa19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 NEDD4P46934 1319 aa19.66■□□□□ 0.74
TRAPPC3-207ENST00000497251 GOLGA8HP0CJ92 632 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 GHRHRQ02643 423 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 DGKDQ16760 1214 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 KCNV1Q6PIU1 500 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 FBXO11Q86XK2 927 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 UBAC1Q9BSL1 405 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 KATNAL1Q9BW62 490 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 UBA5Q9GZZ9 404 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 ZSWIM5Q9P217 1185 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 CHD7Q9P2D1 2997 aa19.65■□□□□ 0.74
TRAPPC3-207ENST00000497251 MUC3AQ02505 3323 aa19.64■□□□□ 0.73
TRAPPC3-207ENST00000497251 GTPBP6O43824 516 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC3-207ENST00000497251 RBL2Q08999 1139 aa19.64■□□□□ 0.73
TRAPPC3-207ENST00000497251 LAMC2Q13753 1193 aa19.64■□□□□ 0.73
TRAPPC3-207ENST00000497251 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
TRAPPC3-207ENST00000497251 DEFB128Q7Z7B8 93 aa19.64■□□□□ 0.73
TRAPPC3-207ENST00000497251 ENAHQ8N8S7 591 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC3-207ENST00000497251 PPM1EQ8WY54 764 aa19.64■□□□□ 0.73
TRAPPC3-207ENST00000497251 ZKSCAN3Q9BRR0 538 aa19.64■□□□□ 0.73
TRAPPC3-207ENST00000497251 FTOQ9C0B1 505 aaKnown RBP eCLIP19.64■□□□□ 0.735e-6■■■□□ 14.7
TRAPPC3-207ENST00000497251 BDP1A6H8Y1 2624 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 EFCAB14O75071 495 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 MMP3P08254 477 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 RABGGTBP53611 331 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 PTGISQ16647 500 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 QRICH1Q2TAL8 776 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 ARHGEF16Q5VV41 709 aa19.63■□□□□ 0.73
TRAPPC3-207ENST00000497251 AFG1LQ8WV93 481 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms