RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 FAM170AA1A519 330 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 DDTLA6NHG4 134 aaPredicted RBP12.88□□□□□ -0.35
CDCA7-208ENST00000496441 STAT3P40763 770 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 ZNF543Q08ER8 600 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 BMS1Q14692 1282 aaKnown RBP12.88□□□□□ -0.35
CDCA7-208ENST00000496441 CCDC122Q5T0U0 273 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 KRT79Q5XKE5 535 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 SLC30A10Q6XR72 485 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 KRT26Q7Z3Y9 468 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
CDCA7-208ENST00000496441 PNMA5Q96PV4 448 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 CRAMP1Q96RY5 1269 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 BLOC1S4Q9NUP1 217 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 SPATA31A6Q5VVP1 1343 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 EDIL3O43854 480 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 HLA-DOAP06340 250 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 HOXA10P31260 410 aaPredicted RBP12.88□□□□□ -0.35
CDCA7-208ENST00000496441 SLC1A4P43007 532 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 AMPD3Q01432 767 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 DMTNQ08495 405 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 KCNB1Q14721 858 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 DDX12PQ92771 950 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 GOLGA1Q92805 767 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 FAM163AQ96GL9 167 aaPredicted RBP12.88□□□□□ -0.35
CDCA7-208ENST00000496441 SUGCTQ9HAC7 445 aa12.88□□□□□ -0.35
CDCA7-208ENST00000496441 REXO2Q9Y3B8 237 aaKnown RBP12.88□□□□□ -0.35
CDCA7-208ENST00000496441 ZNF831Q5JPB2 1677 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 ITIH6Q6UXX5 1313 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 E9PMD0 336 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 CCNE1P24864 410 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 CRKP46108 304 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 GABPAQ06546 454 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 ASPRV1Q53RT3 343 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 APOBEC3HQ6NTF7 200 aaKnown RBP12.87□□□□□ -0.35
CDCA7-208ENST00000496441 WDR59Q6PJI9 974 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 AK8Q96MA6 479 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 PSMB7Q99436 277 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 PCDHA1Q9Y5I3 950 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 APBA3O96018 575 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 EEF2P13639 858 aaKnown RBP12.87□□□□□ -0.35
CDCA7-208ENST00000496441 EEF1GP26641 437 aaKnown RBP12.87□□□□□ -0.35
CDCA7-208ENST00000496441 CHRNA5P30532 468 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 GYS2P54840 703 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 SEPT2Q15019 361 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
CDCA7-208ENST00000496441 THAP9Q9H5L6 903 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 PCDHA12Q9UN75 941 aa12.87□□□□□ -0.35
CDCA7-208ENST00000496441 LY75O60449 1722 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 PCNTO95613 3336 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 PNMA6FA0A0J9YX94 578 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 MEIS1O00470 390 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 EPHB6O15197 1021 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 SASH3O75995 380 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 DNM2P50570 870 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 CNNM4Q6P4Q7 775 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 CUL5Q93034 780 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 NAPGQ99747 312 aaPredicted RBP12.86□□□□□ -0.35
CDCA7-208ENST00000496441 CRACR2AQ9BSW2 395 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 DNAJC18Q9H819 358 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 RCCD1A6NED2 376 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 APBA1Q02410 837 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 CERS3Q8IU89 383 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 ANKRD13CQ8N6S4 541 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 ZNF507Q8TCN5 953 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 CCDC51Q96ER9 411 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 DHTKD1Q96HY7 919 aaPredicted RBP12.86□□□□□ -0.35
CDCA7-208ENST00000496441 MTMR9Q96QG7 549 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 FGFBP2Q9BYJ0 223 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 LACRTQ9GZZ8 138 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
CDCA7-208ENST00000496441 SCAF8Q9UPN6 1271 aaKnown RBP12.86□□□□□ -0.35
CDCA7-208ENST00000496441 BICDL2A1A5D9 508 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 DNA2P51530 1060 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 QRICH1Q2TAL8 776 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 GDAP1L1Q96MZ0 367 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 C7orf25Q9BPX7 421 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 TDRD3Q9H7E2 651 aaKnown RBP12.85□□□□□ -0.35
CDCA7-208ENST00000496441 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
CDCA7-208ENST00000496441 UBR3Q6ZT12 1888 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 POTEB3A0JP26 581 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 POTECB2RU33 542 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 ZMYND10O75800 440 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 HOXA13P31271 388 aaPredicted RBP12.85□□□□□ -0.35
CDCA7-208ENST00000496441 PLA2G4AP47712 749 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 MRPS25P82663 173 aaKnown RBP12.85□□□□□ -0.35
CDCA7-208ENST00000496441 ARID5AQ03989 594 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 CERKLQ49MI3 558 aaPredicted RBP12.85□□□□□ -0.35
CDCA7-208ENST00000496441 CC2D1AQ6P1N0 951 aaPredicted RBP12.85□□□□□ -0.35
CDCA7-208ENST00000496441 POTEBQ6S5H4 581 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 SRGAP1Q7Z6B7 1085 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
CDCA7-208ENST00000496441 HAS1Q92839 578 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 PNKPQ96T60 521 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
CDCA7-208ENST00000496441 NHEJ1Q9H9Q4 299 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms