RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 RGL3Q3MIN7 710 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 LIMS2Q7Z4I7 341 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 SPRED1Q7Z699 444 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 LZTR1Q8N653 840 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 SMARCC1Q92922 1105 aaPredicted RBP5.9□□□□□ -1.46
CLK1-214ENST00000496205 GORASP1Q9BQQ3 440 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 MTA3Q9BTC8 594 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 ST6GALNAC2Q9UJ37 374 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 ZNRF3Q9ULT6 936 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 INVSQ9Y283 1065 aa5.9□□□□□ -1.46
CLK1-214ENST00000496205 SF3B6Q9Y3B4 125 aaKnown RBP5.9□□□□□ -1.46
CLK1-214ENST00000496205 C8BP07358 591 aa5.89□□□□□ -1.47
CLK1-214ENST00000496205 GJA8P48165 433 aa5.89□□□□□ -1.47
CLK1-214ENST00000496205 PPP2R5DQ14738 602 aa5.89□□□□□ -1.47
CLK1-214ENST00000496205 SLC9A5Q14940 896 aa5.89□□□□□ -1.47
CLK1-214ENST00000496205 CDSNQ15517 529 aa5.89□□□□□ -1.47
CLK1-214ENST00000496205 RCSD1Q6JBY9 416 aa5.89□□□□□ -1.47
CLK1-214ENST00000496205 NETO2Q8NC67 525 aa5.89□□□□□ -1.47
CLK1-214ENST00000496205 PEX11GQ96HA9 241 aa5.89□□□□□ -1.47
CLK1-214ENST00000496205 SIT1Q9Y3P8 196 aa5.89□□□□□ -1.47
CLK1-214ENST00000496205 CBFA2T2O43439 604 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 ITGA4P13612 1032 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 HMGA2P52926 109 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 UNC5AQ6ZN44 842 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 RUFY4Q6ZNE9 571 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 CABP7Q86V35 215 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 TAB3Q8N5C8 712 aaPredicted RBP5.88□□□□□ -1.47
CLK1-214ENST00000496205 SLC43A3Q8NBI5 491 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 SH3RF3Q8TEJ3 882 aaPredicted RBP5.88□□□□□ -1.47
CLK1-214ENST00000496205 DVL3Q92997 716 aaPredicted RBP5.88□□□□□ -1.47
CLK1-214ENST00000496205 DRC1Q96MC2 740 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 C11orf84Q9BUA3 381 aaPredicted RBP5.88□□□□□ -1.47
CLK1-214ENST00000496205 GULP1Q9UBP9 304 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 INPP5FQ9Y2H2 1132 aa5.88□□□□□ -1.47
CLK1-214ENST00000496205 AURKAO14965 403 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 SMARCA5O60264 1052 aaPredicted RBP5.87□□□□□ -1.47
CLK1-214ENST00000496205 TACR2P21452 398 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 RPL13P26373 211 aaKnown RBP5.87□□□□□ -1.47
CLK1-214ENST00000496205 THBS2P35442 1172 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 EEF1DP3Q658K8 133 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 CPNE8Q86YQ8 564 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 MCF2L2Q86YR7 1114 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 FAM26EQ8N5C1 309 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 CHST13Q8NET6 341 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 GMLQ99445 158 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 PPP1R1BQ9UD71 204 aaPredicted RBP5.87□□□□□ -1.47
CLK1-214ENST00000496205 NUDT5Q9UKK9 219 aa5.87□□□□□ -1.47
CLK1-214ENST00000496205 DIS3Q9Y2L1 958 aaKnown RBP5.87□□□□□ -1.47
CLK1-214ENST00000496205 A0A087WZG4 1122 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 STXBP3O00186 592 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 VAMP4O75379 141 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 ZBTB7AO95365 584 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 FGRP09769 529 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 CYP2C8P10632 490 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 DNAJA1P31689 397 aaKnown RBP5.86□□□□□ -1.47
CLK1-214ENST00000496205 ACVRL1P37023 503 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 KRTAP1-1Q07627 177 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 KIAA2012Q0VF49 1180 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 MCTP2Q6DN12 878 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 STK32CQ86UX6 486 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 ZFPM1Q8IX07 1006 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 LGI4Q8N135 537 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 ADCY4Q8NFM4 1077 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 GPRASP2Q96D09 838 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 TM9SF2Q99805 663 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 SPON2Q9BUD6 331 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 MRIQ9BWK5 157 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 TANGO6Q9C0B7 1094 aa5.86□□□□□ -1.47
CLK1-214ENST00000496205 ZNF214Q9UL59 606 aaPredicted RBP5.86□□□□□ -1.47
CLK1-214ENST00000496205 ZNF536O15090 1300 aa5.85□□□□□ -1.47
CLK1-214ENST00000496205 LTBP3Q9NS15 1303 aa5.85□□□□□ -1.47
CLK1-214ENST00000496205 MROH6A6NGR9 719 aa5.85□□□□□ -1.47
CLK1-214ENST00000496205 NTRK1P04629 796 aa5.85□□□□□ -1.47
CLK1-214ENST00000496205 WWC2Q6AWC2 1192 aa5.85□□□□□ -1.47
CLK1-214ENST00000496205 CRIP3Q6Q6R5 217 aa5.85□□□□□ -1.47
CLK1-214ENST00000496205 KIAA0825Q8IV33 1275 aa5.85□□□□□ -1.47
CLK1-214ENST00000496205 RASGRP4Q8TDF6 673 aa5.85□□□□□ -1.47
CLK1-214ENST00000496205 MENTQ9BUN1 341 aa5.85□□□□□ -1.47
CLK1-214ENST00000496205 IMPDH2P12268 514 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 ATF4P18848 351 aaPredicted RBP5.84□□□□□ -1.47
CLK1-214ENST00000496205 GDF5P43026 501 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 ICAM4Q14773 271 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 TCEAL1Q15170 157 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 SF3A1Q15459 793 aaKnown RBP5.84□□□□□ -1.47
CLK1-214ENST00000496205 DPY19L1Q2PZI1 675 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 FAM26FQ5R3K3 315 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 PRR31Q5SQ13 230 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 GLB1LQ6UWU2 654 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 KYQ8NBH2 561 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 TXNDC5Q8NBS9 432 aaKnown RBP5.84□□□□□ -1.47
CLK1-214ENST00000496205 TSC22D4Q9Y3Q8 395 aa5.84□□□□□ -1.47
CLK1-214ENST00000496205 GUCY2CP25092 1073 aa5.83□□□□□ -1.48
CLK1-214ENST00000496205 USP33Q8TEY7 942 aa5.83□□□□□ -1.48
CLK1-214ENST00000496205 FERD3LQ96RJ6 166 aa5.83□□□□□ -1.48
CLK1-214ENST00000496205 GINM1Q9NU53 330 aa5.83□□□□□ -1.48
CLK1-214ENST00000496205 PPP4R1LQ9P1A2 415 aa5.83□□□□□ -1.48
CLK1-214ENST00000496205 PPT2Q9UMR5 302 aa5.83□□□□□ -1.48
CLK1-214ENST00000496205 C7orf72A4D263 438 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 C2orf71A6NGG8 1288 aa5.82□□□□□ -1.48
CLK1-214ENST00000496205 DDX3XO00571 662 aaKnown RBP eCLIP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms