RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 VTI1AQ96AJ9 217 aa12.19□□□□□ -0.46
ERGIC3-219ENST00000496172 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
ERGIC3-219ENST00000496172 KATNBL1Q9H079 304 aa12.19□□□□□ -0.46
ERGIC3-219ENST00000496172 LSG1Q9H089 658 aaKnown RBP12.19□□□□□ -0.46
ERGIC3-219ENST00000496172 UPF3AQ9H1J1 476 aaKnown RBP12.19□□□□□ -0.46
ERGIC3-219ENST00000496172 JMJD4Q9H9V9 463 aa12.19□□□□□ -0.46
ERGIC3-219ENST00000496172 STARD7Q9NQZ5 370 aa12.19□□□□□ -0.46
ERGIC3-219ENST00000496172 MRPL11Q9Y3B7 192 aaKnown RBP12.19□□□□□ -0.46
ERGIC3-219ENST00000496172 LRRC37A2A6NM11 1700 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 PALM3A6NDB9 673 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 ZEB2O60315 1214 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 CDC45O75419 566 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 CST5P28325 142 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 MCM5P33992 734 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 PDE4DQ08499 809 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 PPIGQ13427 754 aaKnown RBP eCLIP12.18□□□□□ -0.464e-8■□□□□ 10.9
ERGIC3-219ENST00000496172 GRM4Q14833 912 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 QRICH1Q2TAL8 776 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 TMEM240Q5SV17 173 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 PSRC1Q6PGN9 363 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 SLC30A10Q6XR72 485 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 STOX1Q6ZVD7 989 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 SKAP1Q86WV1 359 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 FBXO16Q8IX29 292 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 TMTC2Q8N394 836 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 MORC4Q8TE76 937 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 NECAB3Q96P71 396 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 PURBQ96QR8 312 aaKnown RBP12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 MTA3Q9BTC8 594 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 AMNQ9BXJ7 453 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 MAD2L2Q9UI95 211 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 Q9Y3F1 56 aa12.18□□□□□ -0.46
ERGIC3-219ENST00000496172 ASTN1O14525 1302 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 MROH7Q68CQ1 1323 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 DCDC2CA8MYV0 355 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 SLC27A2O14975 620 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 DYNC1LI2O43237 492 aaPredicted RBP12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 ASGR1P07306 291 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 SMPD1P17405 629 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 TMEM31Q5JXX7 168 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 CREB3L3Q68CJ9 461 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 NFXL1Q6ZNB6 911 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 C16orf59Q7L2K0 433 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 TLK2Q86UE8 772 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 MB21D2Q8IYB1 491 aaPredicted RBP12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 STAG2Q8N3U4 1231 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 IGDCC4Q8TDY8 1250 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 TMEM87BQ96K49 555 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 TAF6LQ9Y6J9 622 aa12.17□□□□□ -0.46
ERGIC3-219ENST00000496172 ELP1O95163 1332 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 MYADML2A6NDP7 307 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 CCDC69A6NI79 296 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 ZBTB5O15062 677 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 ADCY6O43306 1168 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 PRC1O43663 620 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 GPR37L1O60883 481 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 KIF5BP33176 963 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 NKX3-2P78367 333 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 NECTIN1Q15223 517 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 FSCN1Q16658 493 aaKnown RBP12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 CCSAPQ6IQ19 270 aaPredicted RBP12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 CTCFLQ8NI51 663 aaPredicted RBP12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 NSUN6Q8TEA1 469 aaKnown RBP12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 WDR11Q9BZH6 1224 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 PDGFCQ9NRA1 345 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 MSRAQ9UJ68 235 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 DDX49Q9Y6V7 483 aaKnown RBP12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 MCM3APO60318 1980 aa12.16□□□□□ -0.46
ERGIC3-219ENST00000496172 PRRC2BQ5JSZ5 2229 aaKnown RBP12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 A0A0U1RQG5 324 aaPredicted RBP12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 GRXCR1A8MXD5 290 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 CABYRO75952 493 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 DDAH1O94760 285 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 POU3F3P20264 500 aaPredicted RBP12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 IGFBP4P22692 258 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 GNAQP50148 359 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 ANTXR2P58335 489 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 TROAPQ12815 778 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 CCDC85BQ15834 202 aaPredicted RBP12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 DUSP28Q4G0W2 176 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 BRDTQ58F21 947 aaPredicted RBP12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 HOMER1Q86YM7 354 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 ZNF654Q8IZM8 581 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 SAMD3Q8N6K7 520 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 SYTL5Q8TDW5 730 aaPredicted RBP12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 HERVK_113Q902F9 699 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 MTMR8Q96EF0 704 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 IWS1Q96ST2 819 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 MAP3K14Q99558 947 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 LZTS2Q9BRK4 669 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 EPHX3Q9H6B9 360 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 RIOX1Q9H6W3 641 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 LY9Q9HBG7 655 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 SENP2Q9HC62 589 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 MAP3K20Q9NYL2 800 aaKnown RBP12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 PCDHA1Q9Y5I3 950 aa12.15□□□□□ -0.46
ERGIC3-219ENST00000496172 RBM47A0AV96 593 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms