RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 CGGBP1Q9UFW8 167 aaPredicted RBP7.59□□□□□ -1.19
CLTC-208ENST00000496076 SLC12A7Q9Y666 1083 aa7.59□□□□□ -1.19
CLTC-208ENST00000496076 C7orf72A4D263 438 aa7.58□□□□□ -1.2
CLTC-208ENST00000496076 NPHS1O60500 1241 aa7.58□□□□□ -1.2
CLTC-208ENST00000496076 NTRK1P04629 796 aa7.58□□□□□ -1.2
CLTC-208ENST00000496076 C8BP07358 591 aa7.58□□□□□ -1.2
CLTC-208ENST00000496076 FANCCQ00597 558 aa7.58□□□□□ -1.2
CLTC-208ENST00000496076 SLC7A5Q01650 507 aa7.58□□□□□ -1.2
CLTC-208ENST00000496076 TBC1D10BQ4KMP7 808 aaPredicted RBP7.58□□□□□ -1.2
CLTC-208ENST00000496076 SYT3Q9BQG1 590 aa7.58□□□□□ -1.2
CLTC-208ENST00000496076 PHAXQ9H814 394 aaKnown RBP7.58□□□□□ -1.2
CLTC-208ENST00000496076 TRBV23OR9-2A0A075B6M9 112 aa7.57□□□□□ -1.2
CLTC-208ENST00000496076 MATN3O15232 486 aa7.57□□□□□ -1.2
CLTC-208ENST00000496076 PLATP00750 562 aa7.57□□□□□ -1.2
CLTC-208ENST00000496076 RACK1P63244 317 aaKnown RBP7.57□□□□□ -1.2
CLTC-208ENST00000496076 KIAA2012Q0VF49 1180 aa7.57□□□□□ -1.2
CLTC-208ENST00000496076 RGL3Q3MIN7 710 aa7.57□□□□□ -1.2
CLTC-208ENST00000496076 KRTAP5-3Q6L8H2 238 aa7.57□□□□□ -1.2
CLTC-208ENST00000496076 RCC1LQ96I51 464 aaKnown RBP7.57□□□□□ -1.2
CLTC-208ENST00000496076 C8orf49Q96NF6 230 aa7.57□□□□□ -1.2
CLTC-208ENST00000496076 SAMD11Q96NU1 681 aa7.57□□□□□ -1.2
CLTC-208ENST00000496076 C11orf84Q9BUA3 381 aaPredicted RBP7.57□□□□□ -1.2
CLTC-208ENST00000496076 GINM1Q9NU53 330 aa7.57□□□□□ -1.2
CLTC-208ENST00000496076 RPL13P26373 211 aaKnown RBP7.56□□□□□ -1.2
CLTC-208ENST00000496076 GRB10Q13322 594 aa7.56□□□□□ -1.2
CLTC-208ENST00000496076 COL9A2Q14055 689 aaPredicted RBP7.56□□□□□ -1.2
CLTC-208ENST00000496076 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
CLTC-208ENST00000496076 METTL5Q9NRN9 209 aaKnown RBP7.56□□□□□ -1.2
CLTC-208ENST00000496076 SUGT1Q9Y2Z0 365 aa7.56□□□□□ -1.2
CLTC-208ENST00000496076 A0A1W2PQH9 124 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 C1QTNF3-AMACRE9PGA6 284 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 ZNF16P17020 682 aaPredicted RBP7.55□□□□□ -1.2
CLTC-208ENST00000496076 ZNF20P17024 532 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 THBS2P35442 1172 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 EIF6P56537 245 aaKnown RBP7.55□□□□□ -1.2
CLTC-208ENST00000496076 TTC9BQ8N6N2 239 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 KYQ8NBH2 561 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 PLEKHO2Q8TD55 490 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 C1QTNF3Q9BXJ4 246 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 PCDH18Q9HCL0 1135 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 DDX41Q9UJV9 622 aaKnown RBP7.55□□□□□ -1.2
CLTC-208ENST00000496076 INVSQ9Y283 1065 aa7.55□□□□□ -1.2
CLTC-208ENST00000496076 CD300LDQ6UXZ3 194 aa7.54□□□□□ -1.2
CLTC-208ENST00000496076 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
CLTC-208ENST00000496076 LGI4Q8N135 537 aa7.54□□□□□ -1.2
CLTC-208ENST00000496076 FAM26EQ8N5C1 309 aa7.54□□□□□ -1.2
CLTC-208ENST00000496076 KLHL6Q8WZ60 621 aa7.54□□□□□ -1.2
CLTC-208ENST00000496076 CLEC1BQ9P126 229 aa7.54□□□□□ -1.2
CLTC-208ENST00000496076 MROH6A6NGR9 719 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 FSHBP01225 129 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 GIPRP48546 466 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 FAM26FQ5R3K3 315 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 MCTP2Q6DN12 878 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 STK32CQ86UX6 486 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 FAM124AQ86V42 546 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 DCP2Q8IU60 420 aaKnown RBP7.53□□□□□ -1.2
CLTC-208ENST00000496076 C19orf47Q8N9M1 422 aaKnown RBP7.53□□□□□ -1.2
CLTC-208ENST00000496076 DPF3Q92784 378 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 MARCH2Q9P0N8 246 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 EFR3BQ9Y2G0 817 aa7.53□□□□□ -1.2
CLTC-208ENST00000496076 ZNF536O15090 1300 aa7.52□□□□□ -1.2
CLTC-208ENST00000496076 SGSM2O43147 1006 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 PLS3P13797 630 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 SOX9P48436 509 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 RBM10P98175 930 aaKnown RBP7.52□□□□□ -1.21
CLTC-208ENST00000496076 PAK2Q13177 524 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 MBLAC2Q68D91 279 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 BORAQ6PGQ7 559 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 TTLL6Q8N841 843 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 CHST13Q8NET6 341 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 AP5M1Q9H0R1 490 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 GPRC5CQ9NQ84 441 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 AKT3Q9Y243 479 aa7.52□□□□□ -1.21
CLTC-208ENST00000496076 ZNF513Q8N8E2 541 aaPredicted RBP7.51□□□□□ -1.21
CLTC-208ENST00000496076 TXNDC5Q8NBS9 432 aaKnown RBP7.51□□□□□ -1.21
CLTC-208ENST00000496076 SLC16A11Q8NCK7 471 aa7.51□□□□□ -1.21
CLTC-208ENST00000496076 COPS5Q92905 334 aa7.51□□□□□ -1.21
CLTC-208ENST00000496076 MMP19Q99542 508 aa7.51□□□□□ -1.21
CLTC-208ENST00000496076 SSBP3Q9BWW4 388 aaPredicted RBP7.51□□□□□ -1.21
CLTC-208ENST00000496076 DDX3XO00571 662 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLTC-208ENST00000496076 PPP2R5EQ16537 467 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 KIAA1211LQ6NV74 962 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 GLB1LQ6UWU2 654 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 LIMS2Q7Z4I7 341 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 ZC3H18Q86VM9 953 aaKnown RBP7.5□□□□□ -1.21
CLTC-208ENST00000496076 MIB1Q86YT6 1006 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 TEX2Q8IWB9 1127 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 ZNF654Q8IZM8 581 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 OR6P1Q8NGX9 317 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 SPATA32Q96LK8 384 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 BTG4Q9NY30 223 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 APEX2Q9UBZ4 518 aa7.5□□□□□ -1.21
CLTC-208ENST00000496076 C22orf46C9J442 243 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 KCNH1O95259 989 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 ITGA1P56199 1179 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 SCRN1Q12765 414 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 PRR31Q5SQ13 230 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 C9orf131Q5VYM1 1079 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 SEC14L1Q92503 715 aa7.49□□□□□ -1.21
CLTC-208ENST00000496076 DVL3Q92997 716 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms