RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 CTAGE5O15320 804 aa19.75■□□□□ 0.75
COMMD3-214ENST00000496071 EXOSC10Q01780 885 aaKnown RBP19.75■□□□□ 0.75
COMMD3-214ENST00000496071 RASEFQ8IZ41 740 aa19.75■□□□□ 0.75
COMMD3-214ENST00000496071 VTI1AQ96AJ9 217 aa19.75■□□□□ 0.75
COMMD3-214ENST00000496071 RRP36Q96EU6 259 aaKnown RBP19.75■□□□□ 0.75
COMMD3-214ENST00000496071 LBHD1Q9BQE6 289 aaPredicted RBP19.75■□□□□ 0.75
COMMD3-214ENST00000496071 OPLAHO14841 1288 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 EPB41L2O43491 1005 aaKnown RBP19.74■□□□□ 0.75
COMMD3-214ENST00000496071 CABYRO75952 493 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 MAGEA10P43363 369 aaPredicted RBP19.74■□□□□ 0.75
COMMD3-214ENST00000496071 IRX5P78411 483 aaPredicted RBP19.74■□□□□ 0.75
COMMD3-214ENST00000496071 TLE2Q04725 743 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 COL9A3Q14050 684 aaPredicted RBP19.74■□□□□ 0.75
COMMD3-214ENST00000496071 STXBP2Q15833 593 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 FSCN1Q16658 493 aaKnown RBP19.74■□□□□ 0.75
COMMD3-214ENST00000496071 ARHGEF16Q5VV41 709 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 KCNB2Q92953 911 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 TOX2Q96NM4 488 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 LRRC2Q9BYS8 371 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 COL20A1Q9P218 1284 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 SEC63Q9UGP8 760 aaKnown RBP19.74■□□□□ 0.75
COMMD3-214ENST00000496071 MROH7Q68CQ1 1323 aa19.74■□□□□ 0.75
COMMD3-214ENST00000496071 HSPA4P34932 840 aa19.73■□□□□ 0.75
COMMD3-214ENST00000496071 BEX3Q00994 111 aa19.73■□□□□ 0.75
COMMD3-214ENST00000496071 PPP2R5BQ15173 497 aa19.73■□□□□ 0.75
COMMD3-214ENST00000496071 ADCK5Q3MIX3 580 aa19.73■□□□□ 0.75
COMMD3-214ENST00000496071 ANKRD33Q7Z3H0 272 aa19.73■□□□□ 0.75
COMMD3-214ENST00000496071 FANCBQ8NB91 859 aa19.73■□□□□ 0.75
COMMD3-214ENST00000496071 SEZ6LQ9BYH1 1024 aa19.73■□□□□ 0.75
COMMD3-214ENST00000496071 A0A0U1RQG5 324 aaPredicted RBP19.72■□□□□ 0.75
COMMD3-214ENST00000496071 DCDC2CA8MYV0 355 aa19.72■□□□□ 0.75
COMMD3-214ENST00000496071 GCOM1H8Y6P7 765 aaPredicted RBP19.72■□□□□ 0.75
COMMD3-214ENST00000496071 POLR2MP0CAP2 368 aa19.72■□□□□ 0.75
COMMD3-214ENST00000496071 TTLL4Q14679 1199 aa19.72■□□□□ 0.75
COMMD3-214ENST00000496071 BRDTQ58F21 947 aaPredicted RBP19.72■□□□□ 0.75
COMMD3-214ENST00000496071 UBE2OQ9C0C9 1292 aaKnown RBP19.72■□□□□ 0.75
COMMD3-214ENST00000496071 PXMP2Q9NR77 195 aa19.72■□□□□ 0.75
COMMD3-214ENST00000496071 KIAA1217Q5T5P2 1943 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 ARVCFO00192 962 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 EIF3JO75822 258 aaKnown RBP19.71■□□□□ 0.75
COMMD3-214ENST00000496071 NR3C2P08235 984 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 CLTBP09497 229 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 TXNP10599 105 aaKnown RBP19.71■□□□□ 0.75
COMMD3-214ENST00000496071 RXRAP19793 462 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 CPT1AP50416 773 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 CDK7P50613 346 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 FXR1P51114 621 aaKnown RBP eCLIP19.71■□□□□ 0.75
COMMD3-214ENST00000496071 MDM2Q00987 491 aaPredicted RBP19.71■□□□□ 0.75
COMMD3-214ENST00000496071 TMEM63BQ5T3F8 832 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 SRBD1Q8N5C6 995 aaKnown RBP19.71■□□□□ 0.75
COMMD3-214ENST00000496071 PIBF1Q8WXW3 757 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 PRDM5Q9NQX1 630 aaPredicted RBP19.71■□□□□ 0.75
COMMD3-214ENST00000496071 PDLIM7Q9NR12 457 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 POLR3EQ9NVU0 708 aa19.71■□□□□ 0.75
COMMD3-214ENST00000496071 RBM28Q9NW13 759 aaKnown RBP19.71■□□□□ 0.75
COMMD3-214ENST00000496071 PQBP1O60828 265 aaKnown RBP19.7■□□□□ 0.74
COMMD3-214ENST00000496071 PLEKHA8P1O95397 391 aa19.7■□□□□ 0.74
COMMD3-214ENST00000496071 SLC34A2O95436 690 aa19.7■□□□□ 0.74
COMMD3-214ENST00000496071 EIF2AK2P19525 551 aaKnown RBP19.7■□□□□ 0.74
COMMD3-214ENST00000496071 APOA5Q6Q788 366 aa19.7■□□□□ 0.74
COMMD3-214ENST00000496071 CXCL17Q6UXB2 119 aa19.7■□□□□ 0.74
COMMD3-214ENST00000496071 MICU3Q86XE3 530 aa19.7■□□□□ 0.74
COMMD3-214ENST00000496071 OR6J1Q8NGC5 347 aa19.7■□□□□ 0.74
COMMD3-214ENST00000496071 SNX14Q9Y5W7 946 aa19.7■□□□□ 0.74
COMMD3-214ENST00000496071 DNAH12Q6ZR08 3092 aa19.69■□□□□ 0.74
COMMD3-214ENST00000496071 PSMA5P28066 241 aa19.69■□□□□ 0.74
COMMD3-214ENST00000496071 HOXA13P31271 388 aaPredicted RBP19.69■□□□□ 0.74
COMMD3-214ENST00000496071 FGD1P98174 961 aa19.69■□□□□ 0.74
COMMD3-214ENST00000496071 CCDC62Q6P9F0 684 aa19.69■□□□□ 0.74
COMMD3-214ENST00000496071 BLOC1S2Q6QNY1 142 aa19.69■□□□□ 0.74
COMMD3-214ENST00000496071 SEPT14Q6ZU15 432 aa19.69■□□□□ 0.74
COMMD3-214ENST00000496071 TCEANC2Q96MN5 208 aa19.69■□□□□ 0.74
COMMD3-214ENST00000496071 PDCD2LQ9BRP1 358 aa19.69■□□□□ 0.74
COMMD3-214ENST00000496071 LTBP2Q14767 1821 aa19.69■□□□□ 0.74
COMMD3-214ENST00000496071 TRIM43BA6NCK2 446 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 KIAA0355O15063 1070 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 TLR3O15455 904 aaKnown RBP19.68■□□□□ 0.74
COMMD3-214ENST00000496071 ZBTB43O43298 467 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 KPNA6O60684 536 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 PTGS1P23219 599 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 RCAN1P53805 252 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 FAAP100Q0VG06 881 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 ITGA7Q13683 1181 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 TMTC3Q6ZXV5 915 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 SH3RF1Q7Z6J0 888 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 TDHQ8IZJ6 230 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 CUL5Q93034 780 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 TRIM43Q96BQ3 446 aaPredicted RBP19.68■□□□□ 0.74
COMMD3-214ENST00000496071 JAKMIP1Q96N16 626 aaKnown RBP19.68■□□□□ 0.74
COMMD3-214ENST00000496071 TMEM39AQ9NV64 488 aa19.68■□□□□ 0.74
COMMD3-214ENST00000496071 A6NJR5 290 aa19.67■□□□□ 0.74
COMMD3-214ENST00000496071 RAG1P15918 1043 aa19.67■□□□□ 0.74
COMMD3-214ENST00000496071 PGM5Q15124 567 aa19.67■□□□□ 0.74
COMMD3-214ENST00000496071 KCNV1Q6PIU1 500 aa19.67■□□□□ 0.74
COMMD3-214ENST00000496071 VSIG10LQ86VR7 867 aa19.67■□□□□ 0.74
COMMD3-214ENST00000496071 FCHSD1Q86WN1 690 aa19.67■□□□□ 0.74
COMMD3-214ENST00000496071 RAB11FIP4Q86YS3 637 aa19.67■□□□□ 0.74
COMMD3-214ENST00000496071 CMTR1Q8N1G2 835 aaKnown RBP19.67■□□□□ 0.74
COMMD3-214ENST00000496071 SLC43A3Q8NBI5 491 aa19.67■□□□□ 0.74
COMMD3-214ENST00000496071 BRPF3Q9ULD4 1205 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms