RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 MTG1Q9BT17 334 aaPredicted RBP14.81□□□□□ -0.04
PTPRF-214ENST00000496043 PPP1R12CQ9BZL4 782 aa14.81□□□□□ -0.04
PTPRF-214ENST00000496043 RIOX1Q9H6W3 641 aa14.81□□□□□ -0.04
PTPRF-214ENST00000496043 COL20A1Q9P218 1284 aa14.81□□□□□ -0.04
PTPRF-214ENST00000496043 STXBP5LQ9Y2K9 1186 aa14.81□□□□□ -0.04
PTPRF-214ENST00000496043 TAF6LQ9Y6J9 622 aa14.81□□□□□ -0.04
PTPRF-214ENST00000496043 DNAH12Q6ZR08 3092 aa14.81□□□□□ -0.04
PTPRF-214ENST00000496043 LAMA4Q16363 1823 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-214ENST00000496043 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-214ENST00000496043 A6NJR5 290 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 EIF3JO75822 258 aaKnown RBP14.8□□□□□ -0.04
PTPRF-214ENST00000496043 SUPT20HL2P0C7V6 817 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 PURAQ00577 322 aaKnown RBP14.8□□□□□ -0.04
PTPRF-214ENST00000496043 TROAPQ12815 778 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 ZNF697Q5TEC3 545 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 SEPT14Q6ZU15 432 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 CENPQQ7L2Z9 268 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-214ENST00000496043 TMTC2Q8N394 836 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 COPS5Q92905 334 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 ESYT1Q9BSJ8 1104 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 MTA3Q9BTC8 594 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 TRPV6Q9H1D0 765 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 SENP2Q9HC62 589 aa14.8□□□□□ -0.04
PTPRF-214ENST00000496043 PNMA6FA0A0J9YX94 578 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 NR3C2P08235 984 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 CSF2RAP15509 400 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 CYP2C18P33260 490 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 HSD17B4P51659 736 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 ANTXR2P58335 489 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 TMEM240Q5SV17 173 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 CCDC62Q6P9F0 684 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 CASC1Q6TDU7 716 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 C16orf59Q7L2K0 433 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 HOMER1Q86YM7 354 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 MB21D2Q8IYB1 491 aaPredicted RBP14.79□□□□□ -0.04
PTPRF-214ENST00000496043 PIGSQ96S52 555 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 MAP3K14Q99558 947 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.79□□□□□ -0.044e-24■□□□□ 8.4
PTPRF-214ENST00000496043 LSG1Q9H089 658 aaKnown RBP14.79□□□□□ -0.04
PTPRF-214ENST00000496043 ALDH8A1Q9H2A2 487 aaPredicted RBP14.79□□□□□ -0.04
PTPRF-214ENST00000496043 SEMA6BQ9H3T3 888 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 HIPK3Q9H422 1215 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 SZT2Q5T011 3432 aa14.79□□□□□ -0.04
PTPRF-214ENST00000496043 LTBP2Q14767 1821 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 GCOM1H8Y6P7 765 aaPredicted RBP14.78□□□□□ -0.04
PTPRF-214ENST00000496043 B4GALT4O60513 344 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 PPP1R11O60927 126 aaPredicted RBP14.78□□□□□ -0.04
PTPRF-214ENST00000496043 ARIH2O95376 493 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 GH1P01241 217 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 POLR2MP0CAP2 368 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 EIF2AK2P19525 551 aaKnown RBP14.78□□□□□ -0.04
PTPRF-214ENST00000496043 MCM5P33992 734 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 GHRHRQ02643 423 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 LY6KQ17RY6 165 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 NBPF20Q3BBV1 942 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 SLC17A8Q8NDX2 589 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 FAM161BQ96MY7 647 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 PXMP2Q9NR77 195 aa14.78□□□□□ -0.04
PTPRF-214ENST00000496043 OPLAHO14841 1288 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 SLC27A2O14975 620 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 PRC1O43663 620 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 CYTH3O43739 400 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 FGBP02675 491 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 ACRP10323 421 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 KIF5BP33176 963 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 NECTIN1Q15223 517 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 SLC35G1Q2M3R5 365 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 BMP2KLQ5H9B9 411 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 PSRC1Q6PGN9 363 aaPredicted RBP14.77□□□□□ -0.05
PTPRF-214ENST00000496043 NFXL1Q6ZNB6 911 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 ZNF365Q70YC5 407 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 RPUSD2Q8IZ73 545 aaKnown RBP14.77□□□□□ -0.05
PTPRF-214ENST00000496043 CTCFLQ8NI51 663 aaPredicted RBP14.77□□□□□ -0.05
PTPRF-214ENST00000496043 TMEM87BQ96K49 555 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 LZTS2Q9BRK4 669 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 LY9Q9HBG7 655 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 IL23AQ9NPF7 189 aa14.77□□□□□ -0.05
PTPRF-214ENST00000496043 DDX41Q9UJV9 622 aaKnown RBP14.77□□□□□ -0.05
PTPRF-214ENST00000496043 LCTP09848 1927 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 CCDC69A6NI79 296 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 DDAH1O94760 285 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 MYCLP12524 364 aaPredicted RBP14.76□□□□□ -0.05
PTPRF-214ENST00000496043 CASTP20810 708 aaKnown RBP14.76□□□□□ -0.05
PTPRF-214ENST00000496043 SMARCA1P28370 1054 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 HOXA13P31271 388 aaPredicted RBP14.76□□□□□ -0.05
PTPRF-214ENST00000496043 GNAQP50148 359 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 CCL23P55773 120 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 PTPN11Q06124 597 aaPredicted RBP14.76□□□□□ -0.05
PTPRF-214ENST00000496043 LAMC2Q13753 1193 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 FAM47CQ5HY64 1035 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 CREB3L3Q68CJ9 461 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 NFRKBQ6P4R8 1299 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 KCNV1Q6PIU1 500 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 VSIG10LQ86VR7 867 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 ZNF654Q8IZM8 581 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 AFG1LQ8WV93 481 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 PDCD2LQ9BRP1 358 aa14.76□□□□□ -0.05
PTPRF-214ENST00000496043 NOC4LQ9BVI4 516 aaKnown RBP14.76□□□□□ -0.05
PTPRF-214ENST00000496043 ANO2Q9NQ90 1003 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms