RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 TAPT1Q6NXT6 567 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 EEPD1Q7L9B9 569 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 HEATR3Q7Z4Q2 680 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 TEX2Q8IWB9 1127 aa23.1■■□□□ 1.29
COL9A2-210ENST00000495948 GPKOWQ92917 476 aaPredicted RBP eCLIP23.1■■□□□ 1.29
COL9A2-210ENST00000495948 TNRC18O15417 2968 aaPredicted RBP23.09■■□□□ 1.29
COL9A2-210ENST00000495948 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.09■■□□□ 1.29
COL9A2-210ENST00000495948 EIF2AK2P19525 551 aaKnown RBP23.09■■□□□ 1.29
COL9A2-210ENST00000495948 CST5P28325 142 aaPredicted RBP23.09■■□□□ 1.29
COL9A2-210ENST00000495948 ADCYAP1R1P41586 468 aa23.09■■□□□ 1.29
COL9A2-210ENST00000495948 RNF180Q86T96 592 aa23.09■■□□□ 1.29
COL9A2-210ENST00000495948 UPF3AQ9H1J1 476 aaKnown RBP23.09■■□□□ 1.29
COL9A2-210ENST00000495948 RBM47A0AV96 593 aaKnown RBP23.08■■□□□ 1.29
COL9A2-210ENST00000495948 IFNAR1P17181 557 aa23.08■■□□□ 1.29
COL9A2-210ENST00000495948 TNFAIP2Q03169 654 aa23.08■■□□□ 1.29
COL9A2-210ENST00000495948 NTRK3Q16288 839 aa23.08■■□□□ 1.29
COL9A2-210ENST00000495948 IQSEC1Q6DN90 963 aa23.08■■□□□ 1.29
COL9A2-210ENST00000495948 CUL5Q93034 780 aa23.08■■□□□ 1.29
COL9A2-210ENST00000495948 PDCD2LQ9BRP1 358 aa23.08■■□□□ 1.29
COL9A2-210ENST00000495948 RNF26Q9BY78 433 aaPredicted RBP23.08■■□□□ 1.29
COL9A2-210ENST00000495948 GNEQ9Y223 722 aaKnown RBP23.08■■□□□ 1.29
COL9A2-210ENST00000495948 V9GY48 417 aaPredicted RBP23.08■■□□□ 1.29
COL9A2-210ENST00000495948 MEIS2O14770 477 aa23.07■■□□□ 1.28
COL9A2-210ENST00000495948 PGK1P00558 417 aa23.07■■□□□ 1.28
COL9A2-210ENST00000495948 AK2P54819 239 aa23.07■■□□□ 1.28
COL9A2-210ENST00000495948 GJA9P57773 515 aa23.07■■□□□ 1.28
COL9A2-210ENST00000495948 NKX3-2P78367 333 aa23.07■■□□□ 1.28
COL9A2-210ENST00000495948 CCT2P78371 535 aaKnown RBP23.07■■□□□ 1.28
COL9A2-210ENST00000495948 STXBP2Q15833 593 aa23.07■■□□□ 1.28
COL9A2-210ENST00000495948 PFKFB3Q16875 520 aaPredicted RBP23.07■■□□□ 1.28
COL9A2-210ENST00000495948 GJC2Q5T442 439 aaPredicted RBP23.07■■□□□ 1.28
COL9A2-210ENST00000495948 SPC25Q9HBM1 224 aa23.07■■□□□ 1.28
COL9A2-210ENST00000495948 NCOA5Q9HCD5 579 aaKnown RBP23.07■■□□□ 1.28
COL9A2-210ENST00000495948 PDGFCQ9NRA1 345 aa23.07■■□□□ 1.28
COL9A2-210ENST00000495948 BARHL2Q9NY43 387 aa23.07■■□□□ 1.28
COL9A2-210ENST00000495948 ALPK3Q96L96 1907 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 STXBP3O00186 592 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 PRPF3O43395 683 aaKnown RBP23.06■■□□□ 1.28
COL9A2-210ENST00000495948 NR3C2P08235 984 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 SCG2P13521 617 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 SMPD1P17405 629 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 RBM25P49756 843 aaKnown RBP23.06■■□□□ 1.28
COL9A2-210ENST00000495948 NAPAP54920 295 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 PGM5Q15124 567 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 TYW1BQ6NUM6 668 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 TLK2Q86UE8 772 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 FCHSD1Q86WN1 690 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 KLHDC9Q8NEP7 349 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 SMARCC2Q8TAQ2 1214 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 SCFD2Q8WU76 684 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 PSTPIP2Q9H939 334 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 Q9Y3F1 56 aa23.06■■□□□ 1.28
COL9A2-210ENST00000495948 PDE4DIPQ5VU43 2346 aa23.05■■□□□ 1.28
COL9A2-210ENST00000495948 DUSP28Q4G0W2 176 aa23.05■■□□□ 1.28
COL9A2-210ENST00000495948 USP17L6PQ6QN14 398 aa23.05■■□□□ 1.28
COL9A2-210ENST00000495948 PHKBQ93100 1093 aa23.05■■□□□ 1.28
COL9A2-210ENST00000495948 C22orf23Q9BZE7 217 aa23.05■■□□□ 1.28
COL9A2-210ENST00000495948 WDR11Q9BZH6 1224 aa23.05■■□□□ 1.28
COL9A2-210ENST00000495948 PHF24Q9UPV7 400 aa23.05■■□□□ 1.28
COL9A2-210ENST00000495948 KIAA1217Q5T5P2 1943 aa23.05■■□□□ 1.28
COL9A2-210ENST00000495948 CPLX1O14810 134 aa23.04■■□□□ 1.28
COL9A2-210ENST00000495948 NKRFO15226 690 aaKnown RBP eCLIP23.04■■□□□ 1.28
COL9A2-210ENST00000495948 AKAP17AQ02040 695 aaKnown RBP23.04■■□□□ 1.28
COL9A2-210ENST00000495948 CPLX2Q6PUV4 134 aaKnown RBP23.04■■□□□ 1.28
COL9A2-210ENST00000495948 IL31RAQ8NI17 732 aa23.04■■□□□ 1.28
COL9A2-210ENST00000495948 LARP6Q9BRS8 491 aaKnown RBP23.04■■□□□ 1.28
COL9A2-210ENST00000495948 TSEN34Q9BSV6 310 aaKnown RBP23.04■■□□□ 1.28
COL9A2-210ENST00000495948 UPF2Q9HAU5 1272 aaKnown RBP23.04■■□□□ 1.28
COL9A2-210ENST00000495948 TPCN1Q9ULQ1 816 aa23.04■■□□□ 1.28
COL9A2-210ENST00000495948 ESYT2A0FGR8 921 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 MYADML2A6NDP7 307 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 MOXD2PA6NHM9 499 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 EIF3JO75822 258 aaKnown RBP23.03■■□□□ 1.28
COL9A2-210ENST00000495948 MYCNP04198 464 aaPredicted RBP23.03■■□□□ 1.28
COL9A2-210ENST00000495948 C6orf222P0C671 652 aaPredicted RBP23.03■■□□□ 1.28
COL9A2-210ENST00000495948 CCND2P30279 289 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 NEK4P51957 841 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 STK3Q13188 491 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 TTLL4Q14679 1199 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 PKN1Q16512 942 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 CCSAPQ6IQ19 270 aaPredicted RBP23.03■■□□□ 1.28
COL9A2-210ENST00000495948 NOL8Q76FK4 1167 aaKnown RBP23.03■■□□□ 1.28
COL9A2-210ENST00000495948 GLT8D2Q9H1C3 349 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 RIC8AQ9NPQ8 531 aa23.03■■□□□ 1.28
COL9A2-210ENST00000495948 CTAGE5O15320 804 aa23.02■■□□□ 1.28
COL9A2-210ENST00000495948 PFKFB2O60825 505 aa23.02■■□□□ 1.28
COL9A2-210ENST00000495948 ADCY7P51828 1080 aa23.02■■□□□ 1.28
COL9A2-210ENST00000495948 SCRN1Q12765 414 aa23.02■■□□□ 1.28
COL9A2-210ENST00000495948 VSIG10LQ86VR7 867 aa23.02■■□□□ 1.28
COL9A2-210ENST00000495948 TRIM22Q8IYM9 498 aa23.02■■□□□ 1.28
COL9A2-210ENST00000495948 PCSK9Q8NBP7 692 aaKnown RBP23.02■■□□□ 1.28
COL9A2-210ENST00000495948 CCDC12Q8WUD4 166 aaPredicted RBP23.02■■□□□ 1.28
COL9A2-210ENST00000495948 KIF2CQ99661 725 aa23.02■■□□□ 1.28
COL9A2-210ENST00000495948 SLC26A6Q9BXS9 759 aa23.02■■□□□ 1.28
COL9A2-210ENST00000495948 SLKQ9H2G2 1235 aaPredicted RBP23.02■■□□□ 1.28
COL9A2-210ENST00000495948 STAM2O75886 525 aa23.01■■□□□ 1.27
COL9A2-210ENST00000495948 CDKL5O76039 1030 aa23.01■■□□□ 1.27
COL9A2-210ENST00000495948 UBE2SQ16763 222 aa23.01■■□□□ 1.27
COL9A2-210ENST00000495948 XRRA1Q6P2D8 792 aa23.01■■□□□ 1.27
COL9A2-210ENST00000495948 CCDC148Q8NFR7 591 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms