RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 SH3RF1Q7Z6J0 888 aa20.05■□□□□ 0.8
CTNS-207ENST00000495445 SLC43A3Q8NBI5 491 aa20.05■□□□□ 0.8
CTNS-207ENST00000495445 RMDN3Q96TC7 470 aa20.05■□□□□ 0.8
CTNS-207ENST00000495445 LRRC2Q9BYS8 371 aa20.05■□□□□ 0.8
CTNS-207ENST00000495445 PPP4R2Q9NY27 417 aa20.05■□□□□ 0.8
CTNS-207ENST00000495445 NKRFO15226 690 aaKnown RBP eCLIP20.04■□□□□ 0.8
CTNS-207ENST00000495445 CFBP00751 764 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 CALM1P0DP23 149 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 CALM2P0DP24 149 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 CALM3P0DP25 149 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 GNAQP50148 359 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 MDM2Q00987 491 aaPredicted RBP20.04■□□□□ 0.8
CTNS-207ENST00000495445 FAAP100Q0VG06 881 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 CCDC62Q6P9F0 684 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 HOMER1Q86YM7 354 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 SRBD1Q8N5C6 995 aaKnown RBP20.04■□□□□ 0.8
CTNS-207ENST00000495445 CTCFLQ8NI51 663 aaPredicted RBP20.04■□□□□ 0.8
CTNS-207ENST00000495445 SCFD2Q8WU76 684 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 PXMP2Q9NR77 195 aa20.04■□□□□ 0.8
CTNS-207ENST00000495445 ARVCFO00192 962 aa20.03■□□□□ 0.8
CTNS-207ENST00000495445 KIAA0355O15063 1070 aa20.03■□□□□ 0.8
CTNS-207ENST00000495445 CABYRO75952 493 aa20.03■□□□□ 0.8
CTNS-207ENST00000495445 KRT32Q14532 448 aa20.03■□□□□ 0.8
CTNS-207ENST00000495445 STXBP2Q15833 593 aa20.03■□□□□ 0.8
CTNS-207ENST00000495445 NFXL1Q6ZNB6 911 aa20.03■□□□□ 0.8
CTNS-207ENST00000495445 FANCBQ8NB91 859 aa20.03■□□□□ 0.8
CTNS-207ENST00000495445 PRKAG2Q9UGJ0 569 aa20.03■□□□□ 0.8
CTNS-207ENST00000495445 GRIN2DO15399 1336 aa20.02■□□□□ 0.8
CTNS-207ENST00000495445 A0A0U1RQG5 324 aaPredicted RBP20.02■□□□□ 0.8
CTNS-207ENST00000495445 ZEB2O60315 1214 aa20.02■□□□□ 0.8
CTNS-207ENST00000495445 CLTBP09497 229 aa20.02■□□□□ 0.8
CTNS-207ENST00000495445 ITGB8P26012 769 aa20.02■□□□□ 0.8
CTNS-207ENST00000495445 HSPA4P34932 840 aa20.02■□□□□ 0.8
CTNS-207ENST00000495445 TDHQ8IZJ6 230 aa20.02■□□□□ 0.8
CTNS-207ENST00000495445 UBE2OQ9C0C9 1292 aaKnown RBP20.02■□□□□ 0.8
CTNS-207ENST00000495445 SLC12A7Q9Y666 1083 aa20.02■□□□□ 0.8
CTNS-207ENST00000495445 DCDC2CA8MYV0 355 aa20.01■□□□□ 0.79
CTNS-207ENST00000495445 EPB41L2O43491 1005 aaKnown RBP20.01■□□□□ 0.79
CTNS-207ENST00000495445 PQBP1O60828 265 aaKnown RBP20.01■□□□□ 0.79
CTNS-207ENST00000495445 EIF3JO75822 258 aaKnown RBP20.01■□□□□ 0.79
CTNS-207ENST00000495445 ARIH2O95376 493 aa20.01■□□□□ 0.79
CTNS-207ENST00000495445 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
CTNS-207ENST00000495445 NR3C2P08235 984 aa20.01■□□□□ 0.79
CTNS-207ENST00000495445 ARHGEF16Q5VV41 709 aa20.01■□□□□ 0.79
CTNS-207ENST00000495445 CXCL17Q6UXB2 119 aa20.01■□□□□ 0.79
CTNS-207ENST00000495445 VSIG10LQ86VR7 867 aa20.01■□□□□ 0.79
CTNS-207ENST00000495445 LBHD1Q9BQE6 289 aaPredicted RBP20.01■□□□□ 0.79
CTNS-207ENST00000495445 SEZ6LQ9BYH1 1024 aa20.01■□□□□ 0.79
CTNS-207ENST00000495445 MROH7Q68CQ1 1323 aa20.01■□□□□ 0.79
CTNS-207ENST00000495445 LTBP2Q14767 1821 aa20■□□□□ 0.79
CTNS-207ENST00000495445 A6NJR5 290 aa20■□□□□ 0.79
CTNS-207ENST00000495445 GCOM1H8Y6P7 765 aaPredicted RBP20■□□□□ 0.79
CTNS-207ENST00000495445 CD4P01730 458 aa20■□□□□ 0.79
CTNS-207ENST00000495445 HMGB1P09429 215 aaKnown RBP20■□□□□ 0.79
CTNS-207ENST00000495445 POLR2MP0CAP2 368 aa20■□□□□ 0.79
CTNS-207ENST00000495445 TXNP10599 105 aaKnown RBP20■□□□□ 0.79
CTNS-207ENST00000495445 RXRAP19793 462 aa20■□□□□ 0.79
CTNS-207ENST00000495445 HOXA13P31271 388 aaPredicted RBP20■□□□□ 0.79
CTNS-207ENST00000495445 TTLL4Q14679 1199 aa20■□□□□ 0.79
CTNS-207ENST00000495445 PPP2R5BQ15173 497 aa20■□□□□ 0.79
CTNS-207ENST00000495445 LRIT3Q3SXY7 679 aa20■□□□□ 0.79
CTNS-207ENST00000495445 COPS5Q92905 334 aa20■□□□□ 0.79
CTNS-207ENST00000495445 BADQ92934 168 aa20■□□□□ 0.79
CTNS-207ENST00000495445 VTI1AQ96AJ9 217 aa20■□□□□ 0.79
CTNS-207ENST00000495445 RRP36Q96EU6 259 aaKnown RBP20■□□□□ 0.79
CTNS-207ENST00000495445 PDCD2LQ9BRP1 358 aa20■□□□□ 0.79
CTNS-207ENST00000495445 PRDM5Q9NQX1 630 aaPredicted RBP20■□□□□ 0.79
CTNS-207ENST00000495445 TBX21Q9UL17 535 aa20■□□□□ 0.79
CTNS-207ENST00000495445 BRPF3Q9ULD4 1205 aa20■□□□□ 0.79
CTNS-207ENST00000495445 RGS20O76081 388 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 EIF2AK2P19525 551 aaKnown RBP19.99■□□□□ 0.79
CTNS-207ENST00000495445 CPT1AP50416 773 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 ITGA7Q13683 1181 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 APOA5Q6Q788 366 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 TMTC3Q6ZXV5 915 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 FAM126BQ8IXS8 530 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 CMTR1Q8N1G2 835 aaKnown RBP19.99■□□□□ 0.79
CTNS-207ENST00000495445 FBXL16Q8N461 479 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 OR6J1Q8NGC5 347 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 TMEM39AQ9NV64 488 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 DDX41Q9UJV9 622 aaKnown RBP19.99■□□□□ 0.79
CTNS-207ENST00000495445 SNX14Q9Y5W7 946 aa19.99■□□□□ 0.79
CTNS-207ENST00000495445 SOX1O00570 391 aaPredicted RBP19.98■□□□□ 0.79
CTNS-207ENST00000495445 REC8O95072 547 aa19.98■□□□□ 0.79
CTNS-207ENST00000495445 PURAQ00577 322 aaKnown RBP19.98■□□□□ 0.79
CTNS-207ENST00000495445 PGM5Q15124 567 aa19.98■□□□□ 0.79
CTNS-207ENST00000495445 SEPT14Q6ZU15 432 aa19.98■□□□□ 0.79
CTNS-207ENST00000495445 PIBF1Q8WXW3 757 aa19.98■□□□□ 0.79
CTNS-207ENST00000495445 TCEANC2Q96MN5 208 aa19.98■□□□□ 0.79
CTNS-207ENST00000495445 POLR3EQ9NVU0 708 aa19.98■□□□□ 0.79
CTNS-207ENST00000495445 KIAA1217Q5T5P2 1943 aa19.98■□□□□ 0.79
CTNS-207ENST00000495445 PIK3CDO00329 1044 aa19.97■□□□□ 0.79
CTNS-207ENST00000495445 FUT2Q10981 343 aa19.97■□□□□ 0.79
CTNS-207ENST00000495445 LY6KQ17RY6 165 aa19.97■□□□□ 0.79
CTNS-207ENST00000495445 SYNE3Q6ZMZ3 975 aa19.97■□□□□ 0.79
CTNS-207ENST00000495445 RAB11FIP4Q86YS3 637 aa19.97■□□□□ 0.79
CTNS-207ENST00000495445 FAM217BQ9NTX9 383 aaPredicted RBP19.97■□□□□ 0.79
CTNS-207ENST00000495445 FRMPD4Q14CM0 1322 aa19.97■□□□□ 0.79
CTNS-207ENST00000495445 MEIS2O14770 477 aa19.96■□□□□ 0.79
CTNS-207ENST00000495445 KPNA6O60684 536 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms