RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 MBD1Q9UIS9 605 aaPredicted RBP6.22□□□□□ -1.41
RBM39-240ENST00000495293 SPATA31A6Q5VVP1 1343 aa6.22□□□□□ -1.41
RBM39-240ENST00000495293 AHDC1Q5TGY3 1603 aaPredicted RBP6.21□□□□□ -1.41
RBM39-240ENST00000495293 A0A0G2JLL6 359 aaPredicted RBP6.21□□□□□ -1.42
RBM39-240ENST00000495293 FKTNO75072 461 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 SEMA7AO75326 666 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 PRAMEF1O95521 474 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 RPL10P27635 214 aaKnown RBP6.21□□□□□ -1.42
RBM39-240ENST00000495293 GBP1P32455 592 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 EPHB3P54753 998 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 DUSP4Q13115 394 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 ADGRF1Q5T601 910 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 KRT28Q7Z3Y7 464 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 PMFBP1Q8TBY8 1022 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 DDX17Q92841 729 aaKnown RBP6.21□□□□□ -1.42
RBM39-240ENST00000495293 MAP6Q96JE9 813 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 EPB41L4AQ9HCS5 686 aaPredicted RBP6.21□□□□□ -1.42
RBM39-240ENST00000495293 ADAMTS1Q9UHI8 967 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 TCFL5Q9UL49 500 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 EVC2Q86UK5 1308 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 TRPM1Q7Z4N2 1603 aa6.21□□□□□ -1.42
RBM39-240ENST00000495293 GPRASP1Q5JY77 1395 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 ARHGEF28Q8N1W1 1705 aaKnown RBP6.2□□□□□ -1.42
RBM39-240ENST00000495293 FMN2Q9NZ56 1722 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 ANKARQ7Z5J8 1434 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 NRDCO43847 1150 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 ATE1O95260 518 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 RAG1P15918 1043 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 CLCQ05315 142 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 SNX17Q15036 470 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 NBPF8Q3BBV2 869 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 RNF111Q6ZNA4 994 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 SPPL2CQ8IUH8 684 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 DAGLBQ8NCG7 672 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 KCNC2Q96PR1 638 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 PRDM14Q9GZV8 571 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 UBP1Q9NZI7 540 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 GMIPQ9P107 970 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 GGT7Q9UJ14 662 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 KCTD3Q9Y597 815 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 NHSL1Q5SYE7 1610 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 KIF1AQ12756 1690 aa6.2□□□□□ -1.42
RBM39-240ENST00000495293 ADGRB2O60241 1585 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 COL16A1Q07092 1604 aaPredicted RBP6.19□□□□□ -1.42
RBM39-240ENST00000495293 E9PSI1 815 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 TRIM13O60858 407 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 SYPP08247 313 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 EIF4A3P38919 411 aaKnown RBP6.19□□□□□ -1.42
RBM39-240ENST00000495293 CTSKP43235 329 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 PWP1Q13610 501 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 CDCP2Q5VXM1 449 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 CEP128Q6ZU80 1094 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 TMEM192Q8IY95 271 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 TMEM87AQ8NBN3 555 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 ENOX1Q8TC92 643 aaKnown RBP6.19□□□□□ -1.42
RBM39-240ENST00000495293 ATG4CQ96DT6 458 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 BACH2Q9BYV9 841 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 CNNM2Q9H8M5 875 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 TULP4Q9NRJ4 1543 aa6.19□□□□□ -1.42
RBM39-240ENST00000495293 MED1Q15648 1581 aaPredicted RBP6.18□□□□□ -1.42
RBM39-240ENST00000495293 RALGAPBQ86X10 1494 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 BMP7P18075 431 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 PI3P19957 117 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 CTSWP56202 376 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 CWF19L2Q2TBE0 894 aaKnown RBP6.18□□□□□ -1.42
RBM39-240ENST00000495293 ZNF772Q68DY9 489 aaPredicted RBP6.18□□□□□ -1.42
RBM39-240ENST00000495293 ZNF655Q8N720 491 aaPredicted RBP6.18□□□□□ -1.42
RBM39-240ENST00000495293 LINC00116Q8NCU8 138 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 ZNF296Q8WUU4 475 aaPredicted RBP6.18□□□□□ -1.42
RBM39-240ENST00000495293 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 CNTD2Q9H8S5 307 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 EHMT1Q9H9B1 1298 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 PARD6AQ9NPB6 346 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 ZMYM5Q9UJ78 669 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 CNOT6Q9ULM6 557 aaKnown RBP6.18□□□□□ -1.42
RBM39-240ENST00000495293 ITSN1Q15811 1721 aa6.18□□□□□ -1.42
RBM39-240ENST00000495293 RGPD8O14715 1765 aaPredicted RBP6.18□□□□□ -1.42
RBM39-240ENST00000495293 SHPRHQ149N8 1683 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 QRICH2Q9H0J4 1663 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 OR14I1A6ND48 311 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 SIGLEC6O43699 453 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 CENPBP07199 599 aaPredicted RBP6.17□□□□□ -1.42
RBM39-240ENST00000495293 VIPR1P32241 457 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 KIR2DL1P43626 348 aaPredicted RBP6.17□□□□□ -1.42
RBM39-240ENST00000495293 KIR2DL2P43627 348 aaPredicted RBP6.17□□□□□ -1.42
RBM39-240ENST00000495293 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
RBM39-240ENST00000495293 HS2ST1Q7LGA3 356 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 SUPT16HQ9Y5B9 1047 aaKnown RBP6.17□□□□□ -1.42
RBM39-240ENST00000495293 PCDHGB7Q9Y5F8 929 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 SPATA31A3Q5VYP0 1347 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 ARHGEF10O15013 1369 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 PNPLA6Q8IY17 1366 aa6.17□□□□□ -1.42
RBM39-240ENST00000495293 ST20-MTHFSA0A0A6YYL1 179 aa6.16□□□□□ -1.42
RBM39-240ENST00000495293 FADS2P1A8MWK0 482 aa6.16□□□□□ -1.42
RBM39-240ENST00000495293 MEIS1O00470 390 aa6.16□□□□□ -1.42
RBM39-240ENST00000495293 SHOXO15266 292 aa6.16□□□□□ -1.42
RBM39-240ENST00000495293 IGSF3O75054 1194 aa6.16□□□□□ -1.42
RBM39-240ENST00000495293 RECKO95980 971 aa6.16□□□□□ -1.42
RBM39-240ENST00000495293 PCBP3P57721 371 aaKnown RBP6.16□□□□□ -1.42
RBM39-240ENST00000495293 RNF4P78317 190 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms