RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 CST5P28325 142 aaPredicted RBP16.61■□□□□ 0.25
SCAP-213ENST00000494938 ATN1P54259 1190 aaPredicted RBP16.61■□□□□ 0.25
SCAP-213ENST00000494938 EVCP57679 992 aa16.61■□□□□ 0.25
SCAP-213ENST00000494938 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
SCAP-213ENST00000494938 ARHGEF16Q5VV41 709 aa16.61■□□□□ 0.25
SCAP-213ENST00000494938 WDR11Q9BZH6 1224 aa16.61■□□□□ 0.25
SCAP-213ENST00000494938 PXMP2Q9NR77 195 aa16.61■□□□□ 0.25
SCAP-213ENST00000494938 Q9Y3F1 56 aa16.61■□□□□ 0.25
SCAP-213ENST00000494938 NR2E3Q9Y5X4 410 aa16.61■□□□□ 0.25
SCAP-213ENST00000494938 B4DLN1 442 aa16.6■□□□□ 0.25
SCAP-213ENST00000494938 NR3C2P08235 984 aa16.6■□□□□ 0.25
SCAP-213ENST00000494938 C6orf222P0C671 652 aaPredicted RBP16.6■□□□□ 0.25
SCAP-213ENST00000494938 EIF2AK2P19525 551 aaKnown RBP16.6■□□□□ 0.25
SCAP-213ENST00000494938 MRPL12P52815 198 aaKnown RBP16.6■□□□□ 0.25
SCAP-213ENST00000494938 ACLYP53396 1101 aa16.6■□□□□ 0.25
SCAP-213ENST00000494938 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
SCAP-213ENST00000494938 GNASQ5JWF2 1037 aa16.6■□□□□ 0.25
SCAP-213ENST00000494938 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
SCAP-213ENST00000494938 MPHOSPH6Q99547 160 aaKnown RBP16.6■□□□□ 0.25
SCAP-213ENST00000494938 SEC63Q9UGP8 760 aaKnown RBP16.6■□□□□ 0.25
SCAP-213ENST00000494938 CYP46A1Q9Y6A2 500 aa16.6■□□□□ 0.25
SCAP-213ENST00000494938 V9GY48 417 aaPredicted RBP16.6■□□□□ 0.25
SCAP-213ENST00000494938 MEIS2O14770 477 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 EIF3JO75822 258 aaKnown RBP16.59■□□□□ 0.25
SCAP-213ENST00000494938 PDIA3P30101 505 aaKnown RBP16.59■□□□□ 0.25
SCAP-213ENST00000494938 METAP2P50579 478 aaKnown RBP eCLIP16.59■□□□□ 0.255e-7■■□□□ 14.3
SCAP-213ENST00000494938 BEX3Q00994 111 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 SNX17Q15036 470 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 PPP2R5BQ15173 497 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 STXBP2Q15833 593 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 CCDC62Q6P9F0 684 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 VSIG10LQ86VR7 867 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 FCHSD1Q86WN1 690 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 C7orf61Q8IZ16 206 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 IL17RAQ96F46 866 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
SCAP-213ENST00000494938 SPC25Q9HBM1 224 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 NAP1L2Q9ULW6 460 aaPredicted RBP16.59■□□□□ 0.25
SCAP-213ENST00000494938 PLXNA1Q9UIW2 1896 aa16.59■□□□□ 0.25
SCAP-213ENST00000494938 A0A1W2PQ45 241 aaPredicted RBP16.58■□□□□ 0.24
SCAP-213ENST00000494938 A0A1W2PQY0 241 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 MOXD2PA6NHM9 499 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 PIK3CDO00329 1044 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 ARIH2O95376 493 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 ASGR1P07306 291 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 C1orf53Q5VUE5 145 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 TLK2Q86UE8 772 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 SCFD2Q8WU76 684 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 LARP6Q9BRS8 491 aaKnown RBP16.58■□□□□ 0.24
SCAP-213ENST00000494938 AP5M1Q9H0R1 490 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 CNTNAP5Q8WYK1 1306 aa16.58■□□□□ 0.24
SCAP-213ENST00000494938 RGS20O76081 388 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 RTP1P59025 263 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 ANAPC15P60006 121 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 PGM5Q15124 567 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 NTRK3Q16288 839 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 FSCN1Q16658 493 aaKnown RBP16.57■□□□□ 0.24
SCAP-213ENST00000494938 WWC2Q6AWC2 1192 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 TYW1BQ6NUM6 668 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 SEPT14Q6ZU15 432 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 PCSK9Q8NBP7 692 aaKnown RBP16.57■□□□□ 0.24
SCAP-213ENST00000494938 IL31RAQ8NI17 732 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 COPS5Q92905 334 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 PSTPIP2Q9H939 334 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 PDRG1Q9NUG6 133 aa16.57■□□□□ 0.24
SCAP-213ENST00000494938 NID2Q14112 1375 aa16.56■□□□□ 0.24
SCAP-213ENST00000494938 BAZ2BQ9UIF8 2168 aaKnown RBP16.56■□□□□ 0.24
SCAP-213ENST00000494938 CCDC196A0A1B0GTZ2 297 aa16.56■□□□□ 0.24
SCAP-213ENST00000494938 TXNP10599 105 aaKnown RBP16.56■□□□□ 0.24
SCAP-213ENST00000494938 LY6KQ17RY6 165 aa16.56■□□□□ 0.24
SCAP-213ENST00000494938 C8orf34Q49A92 452 aa16.56■□□□□ 0.24
SCAP-213ENST00000494938 HEATR3Q7Z4Q2 680 aa16.56■□□□□ 0.24
SCAP-213ENST00000494938 GPKOWQ92917 476 aaPredicted RBP eCLIP16.56■□□□□ 0.24
SCAP-213ENST00000494938 ALDH8A1Q9H2A2 487 aaPredicted RBP16.56■□□□□ 0.24
SCAP-213ENST00000494938 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
SCAP-213ENST00000494938 DDX41Q9UJV9 622 aaKnown RBP16.56■□□□□ 0.24
SCAP-213ENST00000494938 ZMYND8Q9ULU4 1186 aaPredicted RBP16.56■□□□□ 0.24
SCAP-213ENST00000494938 LCTP09848 1927 aa16.55■□□□□ 0.24
SCAP-213ENST00000494938 ELP1O95163 1332 aa16.55■□□□□ 0.24
SCAP-213ENST00000494938 FRMPD4Q14CM0 1322 aa16.55■□□□□ 0.24
SCAP-213ENST00000494938 STXBP3O00186 592 aa16.55■□□□□ 0.24
SCAP-213ENST00000494938 NKRFO15226 690 aaKnown RBP eCLIP16.55■□□□□ 0.24
SCAP-213ENST00000494938 MYCLP12524 364 aaPredicted RBP16.55■□□□□ 0.24
SCAP-213ENST00000494938 CDK7P50613 346 aa16.55■□□□□ 0.24
SCAP-213ENST00000494938 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
SCAP-213ENST00000494938 MRPS9P82933 396 aaKnown RBP16.55■□□□□ 0.24
SCAP-213ENST00000494938 TTLL4Q14679 1199 aa16.55■□□□□ 0.24
SCAP-213ENST00000494938 TRIM60Q495X7 471 aa16.55■□□□□ 0.24
SCAP-213ENST00000494938 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
SCAP-213ENST00000494938 ZFP91Q96JP5 570 aaPredicted RBP16.55■□□□□ 0.24
SCAP-213ENST00000494938 PRO3102Q9H379 93 aa16.55■□□□□ 0.24
SCAP-213ENST00000494938 NCOA5Q9HCD5 579 aaKnown RBP16.55■□□□□ 0.24
SCAP-213ENST00000494938 ATP11BQ9Y2G3 1177 aa16.55■□□□□ 0.24
SCAP-213ENST00000494938 RANBP2P49792 3224 aaKnown RBP16.55■□□□□ 0.24
SCAP-213ENST00000494938 CEP290O15078 2479 aa16.54■□□□□ 0.24
SCAP-213ENST00000494938 GRIN2DO15399 1336 aa16.54■□□□□ 0.24
SCAP-213ENST00000494938 PRPF3O43395 683 aaKnown RBP16.54■□□□□ 0.24
SCAP-213ENST00000494938 EIF5BO60841 1220 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms