RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 LBHD1Q9BQE6 289 aaPredicted RBP20.4■□□□□ 0.86
HDAC4-211ENST00000494800 SMCHD1A6NHR9 2005 aa20.39■□□□□ 0.86
HDAC4-211ENST00000494800 MCM3APO60318 1980 aa20.39■□□□□ 0.86
HDAC4-211ENST00000494800 ALPK3Q96L96 1907 aa20.39■□□□□ 0.86
HDAC4-211ENST00000494800 MROH7Q68CQ1 1323 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 RBM47A0AV96 593 aaKnown RBP20.39■□□□□ 0.85
HDAC4-211ENST00000494800 MYADML2A6NDP7 307 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 ZBTB43O43298 467 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 CABYRO75952 493 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 COL9A3Q14050 684 aaPredicted RBP20.39■□□□□ 0.85
HDAC4-211ENST00000494800 TTLL4Q14679 1199 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 SLC35G1Q2M3R5 365 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 APOA5Q6Q788 366 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 PRDM5Q9NQX1 630 aaPredicted RBP20.39■□□□□ 0.85
HDAC4-211ENST00000494800 COL20A1Q9P218 1284 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 SNX14Q9Y5W7 946 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 LRRC37A2A6NM11 1700 aa20.39■□□□□ 0.85
HDAC4-211ENST00000494800 LCTP09848 1927 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 A0A1W2PPC1 479 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 OPLAHO14841 1288 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 PLEKHA8P1O95397 391 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 EIF2AK2P19525 551 aaKnown RBP20.38■□□□□ 0.85
HDAC4-211ENST00000494800 CPT1AP50416 773 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 BEX3Q00994 111 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 TMTC3Q6ZXV5 915 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 RAB11FIP4Q86YS3 637 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 SRBD1Q8N5C6 995 aaKnown RBP20.38■□□□□ 0.85
HDAC4-211ENST00000494800 CUL5Q93034 780 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 TCEANC2Q96MN5 208 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 PXMP2Q9NR77 195 aa20.38■□□□□ 0.85
HDAC4-211ENST00000494800 RBM27Q9P2N5 1060 aaKnown RBP20.38■□□□□ 0.85
HDAC4-211ENST00000494800 NAP1L2Q9ULW6 460 aaPredicted RBP20.38■□□□□ 0.85
HDAC4-211ENST00000494800 MYH6P13533 1939 aa20.37■□□□□ 0.85
HDAC4-211ENST00000494800 A0A0U1RQG5 324 aaPredicted RBP20.37■□□□□ 0.85
HDAC4-211ENST00000494800 KLF18A0A0U1RQI7 1052 aa20.37■□□□□ 0.85
HDAC4-211ENST00000494800 DCDC2CA8MYV0 355 aa20.37■□□□□ 0.85
HDAC4-211ENST00000494800 EIF5BO60841 1220 aaKnown RBP20.37■□□□□ 0.85
HDAC4-211ENST00000494800 EIF3JO75822 258 aaKnown RBP20.37■□□□□ 0.85
HDAC4-211ENST00000494800 TXNP10599 105 aaKnown RBP20.37■□□□□ 0.85
HDAC4-211ENST00000494800 HOXA13P31271 388 aaPredicted RBP20.37■□□□□ 0.85
HDAC4-211ENST00000494800 RCAN1P53805 252 aa20.37■□□□□ 0.85
HDAC4-211ENST00000494800 RTN1Q16799 776 aa20.37■□□□□ 0.85
HDAC4-211ENST00000494800 OR6J1Q8NGC5 347 aa20.37■□□□□ 0.85
HDAC4-211ENST00000494800 PQBP1O60828 265 aaKnown RBP20.36■□□□□ 0.85
HDAC4-211ENST00000494800 NR3C2P08235 984 aa20.36■□□□□ 0.85
HDAC4-211ENST00000494800 BMP8BP34820 402 aa20.36■□□□□ 0.85
HDAC4-211ENST00000494800 MAGEA10P43363 369 aaPredicted RBP20.36■□□□□ 0.85
HDAC4-211ENST00000494800 TLE2Q04725 743 aa20.36■□□□□ 0.85
HDAC4-211ENST00000494800 SEPT14Q6ZU15 432 aa20.36■□□□□ 0.85
HDAC4-211ENST00000494800 CMTR1Q8N1G2 835 aaKnown RBP20.36■□□□□ 0.85
HDAC4-211ENST00000494800 CCDC82Q8N4S0 544 aa20.36■□□□□ 0.85
HDAC4-211ENST00000494800 TOX2Q96NM4 488 aa20.36■□□□□ 0.85
HDAC4-211ENST00000494800 GDF15Q99988 308 aa20.36■□□□□ 0.85
HDAC4-211ENST00000494800 SEZ6LQ9BYH1 1024 aa20.36■□□□□ 0.85
HDAC4-211ENST00000494800 POLR3EQ9NVU0 708 aa20.36■□□□□ 0.85
HDAC4-211ENST00000494800 CCDC196A0A1B0GTZ2 297 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 GOLGA8AA7E2F4 631 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 GOLGA8BA8MQT2 603 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 CTAGE5O15320 804 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 CLTBP09497 229 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 CASTP20810 708 aaKnown RBP20.35■□□□□ 0.85
HDAC4-211ENST00000494800 IRX5P78411 483 aaPredicted RBP20.35■□□□□ 0.85
HDAC4-211ENST00000494800 Q6ZUG5 572 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 ANKRD33Q7Z3H0 272 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 FCHSD1Q86WN1 690 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 SMARCC2Q8TAQ2 1214 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 PDCD2LQ9BRP1 358 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 UBE2OQ9C0C9 1292 aaKnown RBP20.35■□□□□ 0.85
HDAC4-211ENST00000494800 PRO3102Q9H379 93 aa20.35■□□□□ 0.85
HDAC4-211ENST00000494800 TLR3O15455 904 aaKnown RBP20.34■□□□□ 0.85
HDAC4-211ENST00000494800 MYCLP12524 364 aaPredicted RBP20.34■□□□□ 0.85
HDAC4-211ENST00000494800 RPS6KB1P23443 525 aa20.34■□□□□ 0.85
HDAC4-211ENST00000494800 CCND2P30279 289 aa20.34■□□□□ 0.85
HDAC4-211ENST00000494800 KCNV1Q6PIU1 500 aa20.34■□□□□ 0.85
HDAC4-211ENST00000494800 CXCL17Q6UXB2 119 aa20.34■□□□□ 0.85
HDAC4-211ENST00000494800 PDLIM7Q9NR12 457 aa20.34■□□□□ 0.85
HDAC4-211ENST00000494800 BRPF3Q9ULD4 1205 aa20.34■□□□□ 0.85
HDAC4-211ENST00000494800 MRVI1Q9Y6F6 885 aa20.34■□□□□ 0.85
HDAC4-211ENST00000494800 ARVCFO00192 962 aa20.33■□□□□ 0.85
HDAC4-211ENST00000494800 KPNA6O60684 536 aa20.33■□□□□ 0.85
HDAC4-211ENST00000494800 CPA1P15085 419 aa20.33■□□□□ 0.85
HDAC4-211ENST00000494800 METAP2P50579 478 aaKnown RBP eCLIP20.33■□□□□ 0.85
HDAC4-211ENST00000494800 MDM2Q00987 491 aaPredicted RBP20.33■□□□□ 0.85
HDAC4-211ENST00000494800 PGM5Q15124 567 aa20.33■□□□□ 0.85
HDAC4-211ENST00000494800 TMEM63BQ5T3F8 832 aa20.33■□□□□ 0.85
HDAC4-211ENST00000494800 HEATR3Q7Z4Q2 680 aa20.33■□□□□ 0.85
HDAC4-211ENST00000494800 BRF1Q92994 677 aa20.33■□□□□ 0.85
HDAC4-211ENST00000494800 USP26Q9BXU7 913 aa20.33■□□□□ 0.85
HDAC4-211ENST00000494800 TMEM39AQ9NV64 488 aa20.33■□□□□ 0.85
HDAC4-211ENST00000494800 CEP290O15078 2479 aa20.32■□□□□ 0.84
HDAC4-211ENST00000494800 PIK3CDO00329 1044 aa20.32■□□□□ 0.84
HDAC4-211ENST00000494800 GH1P01241 217 aa20.32■□□□□ 0.84
HDAC4-211ENST00000494800 VSIG10LQ86VR7 867 aa20.32■□□□□ 0.84
HDAC4-211ENST00000494800 FBXL16Q8N461 479 aa20.32■□□□□ 0.84
HDAC4-211ENST00000494800 PSTPIP2Q9H939 334 aa20.32■□□□□ 0.84
HDAC4-211ENST00000494800 CYP46A1Q9Y6A2 500 aa20.32■□□□□ 0.84
HDAC4-211ENST00000494800 DNAH12Q6ZR08 3092 aa20.31■□□□□ 0.84
HDAC4-211ENST00000494800 STAM2O75886 525 aa20.31■□□□□ 0.84
HDAC4-211ENST00000494800 MYL3P08590 195 aa20.31■□□□□ 0.84
HDAC4-211ENST00000494800 RAG1P15918 1043 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms