RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HTRA3P83110 453 aa6.73□□□□□ -1.33
SMC4-224ENST00000494612 PRR5P85299 388 aa6.73□□□□□ -1.33
SMC4-224ENST00000494612 KRTAP1-1Q07627 177 aa6.73□□□□□ -1.33
SMC4-224ENST00000494612 RAB33AQ14088 237 aa6.73□□□□□ -1.33
SMC4-224ENST00000494612 BICRALQ6AI39 1079 aa6.73□□□□□ -1.33
SMC4-224ENST00000494612 FIBCD1Q8N539 461 aa6.73□□□□□ -1.33
SMC4-224ENST00000494612 OSBPL2Q9H1P3 480 aa6.73□□□□□ -1.33
SMC4-224ENST00000494612 PIF1Q9H611 641 aa6.73□□□□□ -1.33
SMC4-224ENST00000494612 A0A087WZG4 1122 aa6.72□□□□□ -1.33
SMC4-224ENST00000494612 C6orf15Q6UXA7 325 aaPredicted RBP6.72□□□□□ -1.33
SMC4-224ENST00000494612 SAPCD2Q86UD0 394 aa6.72□□□□□ -1.33
SMC4-224ENST00000494612 RNF38Q9H0F5 515 aa6.72□□□□□ -1.33
SMC4-224ENST00000494612 SUSD2Q9UGT4 822 aa6.72□□□□□ -1.33
SMC4-224ENST00000494612 ZNF214Q9UL59 606 aaPredicted RBP6.72□□□□□ -1.33
SMC4-224ENST00000494612 F8W031 263 aaPredicted RBP6.71□□□□□ -1.34
SMC4-224ENST00000494612 FSHBP01225 129 aa6.71□□□□□ -1.34
SMC4-224ENST00000494612 IFNGR1P15260 489 aa6.71□□□□□ -1.34
SMC4-224ENST00000494612 CASP7P55210 303 aa6.71□□□□□ -1.34
SMC4-224ENST00000494612 DLX2Q07687 328 aaPredicted RBP6.71□□□□□ -1.34
SMC4-224ENST00000494612 GNPTABQ3T906 1256 aa6.71□□□□□ -1.34
SMC4-224ENST00000494612 SOGA3Q5TF21 947 aa6.71□□□□□ -1.34
SMC4-224ENST00000494612 LIPIQ6XZB0 460 aa6.71□□□□□ -1.34
SMC4-224ENST00000494612 ADGRG2Q8IZP9 1017 aa6.71□□□□□ -1.34
SMC4-224ENST00000494612 SLC16A11Q8NCK7 471 aa6.71□□□□□ -1.34
SMC4-224ENST00000494612 SF3B6Q9Y3B4 125 aaKnown RBP6.71□□□□□ -1.34
SMC4-224ENST00000494612 A0A1B0GTL3 188 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 A0A1W2PQJ5 194 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 SH3D21A4FU49 640 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 CBFA2T2O43439 604 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 GJB6O95452 261 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 TBC1D8O95759 1140 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 GLI4P10075 376 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 L1CAMP32004 1257 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 FXNQ16595 210 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 KIAA1211LQ6NV74 962 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 VHLLQ6RSH7 139 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 FERMT3Q86UX7 667 aa6.7□□□□□ -1.34
SMC4-224ENST00000494612 ZNF526Q8TF50 670 aaPredicted RBP6.7□□□□□ -1.34
SMC4-224ENST00000494612 SRPK1Q96SB4 655 aaKnown RBP6.7□□□□□ -1.34
SMC4-224ENST00000494612 DIS3Q9Y2L1 958 aaKnown RBP6.7□□□□□ -1.34
SMC4-224ENST00000494612 FAM221BA6H8Z2 402 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 MATN3O15232 486 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 ASGR2P07307 311 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 NCAM1P13591 858 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 TACR1P25103 407 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 ADAM17P78536 824 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 POU4F1Q01851 419 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 DDR2Q16832 855 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 NT5DC1Q5TFE4 455 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 RCSD1Q6JBY9 416 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 FAM178BQ8IXR5 827 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 C19orf47Q8N9M1 422 aaKnown RBP6.69□□□□□ -1.34
SMC4-224ENST00000494612 NOL6Q9H6R4 1146 aaKnown RBP6.69□□□□□ -1.34
SMC4-224ENST00000494612 SMPD4Q9NXE4 827 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 SIRPGQ9P1W8 387 aa6.69□□□□□ -1.34
SMC4-224ENST00000494612 CDK11AQ9UQ88 783 aaPredicted RBP6.69□□□□□ -1.34
SMC4-224ENST00000494612 CD3EP07766 207 aa6.68□□□□□ -1.34
SMC4-224ENST00000494612 ITGA4P13612 1032 aa6.68□□□□□ -1.34
SMC4-224ENST00000494612 SERINC3Q13530 473 aa6.68□□□□□ -1.34
SMC4-224ENST00000494612 B3GNT8Q7Z7M8 397 aa6.68□□□□□ -1.34
SMC4-224ENST00000494612 SORCS2Q96PQ0 1159 aa6.68□□□□□ -1.34
SMC4-224ENST00000494612 MCMBPQ9BTE3 642 aa6.68□□□□□ -1.34
SMC4-224ENST00000494612 PMF1-BGLAPU3KQ54 211 aa6.68□□□□□ -1.34
SMC4-224ENST00000494612 PPP1R11O60927 126 aaPredicted RBP6.67□□□□□ -1.34
SMC4-224ENST00000494612 MC3RP41968 323 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 HMGA2P52926 109 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 SLC7A5Q01650 507 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 NBPF6Q5VWK0 638 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 GIMAP6Q6P9H5 292 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 NBPF4Q96M43 638 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 ZDHHC15Q96MV8 337 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 SPATA25Q9BR10 227 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 SNTG2Q9NY99 539 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 FBLN5Q9UBX5 448 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 SLC12A7Q9Y666 1083 aa6.67□□□□□ -1.34
SMC4-224ENST00000494612 AURKAO14965 403 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 NOBOXO60393 691 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 TCEAL1Q15170 157 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 EEF1DP3Q658K8 133 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 MRM1Q6IN84 353 aaKnown RBP6.66□□□□□ -1.34
SMC4-224ENST00000494612 KLHL6Q8WZ60 621 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 PPP1R14AQ96A00 147 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 TSPAN17Q96FV3 270 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 MRFAP1L1Q96HT8 127 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 FGD4Q96M96 766 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 DEPDC7Q96QD5 511 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 PHAXQ9H814 394 aaKnown RBP6.66□□□□□ -1.34
SMC4-224ENST00000494612 WHRNQ9P202 907 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 FAN1Q9Y2M0 1017 aa6.66□□□□□ -1.34
SMC4-224ENST00000494612 PMLP29590 882 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 PPP2R5DQ14738 602 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 CPA5Q8WXQ8 436 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 DNAJC7Q99615 494 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 HAUS7Q99871 368 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 MTA3Q9BTC8 594 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 LGR4Q9BXB1 951 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 KLHL25Q9H0H3 589 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 RXFP1Q9HBX9 757 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 PFDN2Q9UHV9 154 aa6.65□□□□□ -1.34
SMC4-224ENST00000494612 DBR1Q9UK59 544 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms