RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 SIGLEC14Q08ET2 396 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 SMAD4Q13485 552 aaKnown RBP8.19□□□□□ -1.1
FN1-225ENST00000494446 MTX1Q13505 466 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 GPNMBQ14956 572 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 PTGISQ16647 500 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 DUSP28Q4G0W2 176 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 NFRKBQ6P4R8 1299 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 LRRC8DQ7L1W4 858 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 OR6J1Q8NGC5 347 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 CNTNAP3BQ96NU0 1288 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 SAMD11Q96NU1 681 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 CNTNAP3Q9BZ76 1288 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 ANTXR1Q9H6X2 564 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 SLC38A10Q9HBR0 1119 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 DCP1AQ9NPI6 582 aaPredicted RBP8.19□□□□□ -1.1
FN1-225ENST00000494446 GPR108Q9NPR9 543 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 SMC4Q9NTJ3 1288 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 CD207Q9UJ71 328 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 CHD8Q9HCK8 2581 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 ATRXP46100 2492 aa8.19□□□□□ -1.1
FN1-225ENST00000494446 FRYLO94915 3013 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 CYP2D7A0A087X1C5 515 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 PNMA6EA0A0J9YXQ4 647 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 F5H6K3 240 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 NBNO60934 754 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 EFCAB14O75071 495 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 GNAI3P08754 354 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 NBL1P41271 181 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 PTPN11Q06124 597 aaPredicted RBP8.18□□□□□ -1.1
FN1-225ENST00000494446 KLRC3Q07444 240 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 HYAL1Q12794 435 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 BRDTQ58F21 947 aaPredicted RBP8.18□□□□□ -1.1
FN1-225ENST00000494446 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.18□□□□□ -1.14e-56■□□□□ 10.5
FN1-225ENST00000494446 DGLUCYQ7Z3D6 616 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 FRMD5Q7Z6J6 570 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 TMEM192Q8IY95 271 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 MYOCDQ8IZQ8 938 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 CAGE1Q8TC20 777 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 NKD2Q969F2 451 aaPredicted RBP8.18□□□□□ -1.1
FN1-225ENST00000494446 WDR11Q9BZH6 1224 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 CCDC8Q9H0W5 538 aaPredicted RBP8.18□□□□□ -1.1
FN1-225ENST00000494446 ACAD9Q9H845 621 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 VTA1Q9NP79 307 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 A1CFQ9NQ94 594 aaKnown RBP8.18□□□□□ -1.1
FN1-225ENST00000494446 RNF146Q9NTX7 359 aa8.18□□□□□ -1.1
FN1-225ENST00000494446 LOC730098B7Z3J9 87 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 LINC01565O15544 149 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 TBX10O75333 385 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 CSPG5O95196 566 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 NDUFB10O96000 172 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 PDGFBP01127 241 aaPredicted RBP8.17□□□□□ -1.1
FN1-225ENST00000494446 CXCL10P02778 98 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 AMHP03971 560 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 GTF2F1P35269 517 aaKnown RBP eCLIP8.17□□□□□ -1.1
FN1-225ENST00000494446 GDF6Q6KF10 455 aaPredicted RBP8.17□□□□□ -1.1
FN1-225ENST00000494446 AMOTL1Q8IY63 956 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 LCORLQ8N3X6 602 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 ASIC4Q96FT7 647 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 TLR7Q9NYK1 1049 aaKnown RBP8.17□□□□□ -1.1
FN1-225ENST00000494446 DBNLQ9UJU6 430 aaKnown RBP8.17□□□□□ -1.1
FN1-225ENST00000494446 ISY1Q9ULR0 285 aaKnown RBP8.17□□□□□ -1.1
FN1-225ENST00000494446 NOB1Q9ULX3 412 aaKnown RBP8.17□□□□□ -1.1
FN1-225ENST00000494446 KIAA1671Q9BY89 1806 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 KIAA1217Q5T5P2 1943 aa8.17□□□□□ -1.1
FN1-225ENST00000494446 PRKAB2O43741 272 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 KPNA6O60684 536 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 UPP2O95045 317 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 PARNO95453 639 aaKnown RBP8.16□□□□□ -1.1
FN1-225ENST00000494446 CKBP12277 381 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 ALAS1P13196 640 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 PDE6AP16499 860 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 NDUFV1P49821 464 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 NUBP1P53384 320 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 OAZ1P54368 228 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 HTRA4P83105 476 aaPredicted RBP8.16□□□□□ -1.1
FN1-225ENST00000494446 ALDH1L2Q3SY69 923 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 SLC9C2Q5TAH2 1124 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 C12orf60Q5U649 245 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 TMED8Q6PL24 325 aaPredicted RBP8.16□□□□□ -1.1
FN1-225ENST00000494446 C16orf86Q6ZW13 317 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 FBXO11Q86XK2 927 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 DHX38Q92620 1227 aaKnown RBP8.16□□□□□ -1.1
FN1-225ENST00000494446 RAD50Q92878 1312 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 RMDN1Q96DB5 314 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 RPGRIP1Q96KN7 1286 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 TRERF1Q96PN7 1200 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 PURBQ96QR8 312 aaKnown RBP8.16□□□□□ -1.1
FN1-225ENST00000494446 YME1L1Q96TA2 773 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 API5Q9BZZ5 524 aaKnown RBP8.16□□□□□ -1.1
FN1-225ENST00000494446 ARMT1Q9H993 441 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 FEM1BQ9UK73 627 aa8.16□□□□□ -1.1
FN1-225ENST00000494446 PKD1L2Q7Z442 2459 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 DNAH14Q0VDD8 3507 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 CFAP47Q6ZTR5 3102 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 ANKRD11Q6UB99 2663 aaPredicted RBP8.15□□□□□ -1.1
FN1-225ENST00000494446 ZNF532Q9HCE3 1301 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 GNAI2P04899 355 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 CTNNB1P35222 781 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 NSMFQ6X4W1 530 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms