RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 TMEM201Q5SNT2 666 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 ATAT1Q5SQI0 421 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 DARS2Q6PI48 645 aaKnown RBP7.97□□□□□ -1.13
SNX13-210ENST00000494402 GALNT5Q7Z7M9 940 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 BVESQ8NE79 360 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 USP13Q92995 863 aaPredicted RBP7.97□□□□□ -1.13
SNX13-210ENST00000494402 ZNF496Q96IT1 587 aaPredicted RBP7.97□□□□□ -1.13
SNX13-210ENST00000494402 TEKT5Q96M29 485 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 MYCBPQ99417 103 aaPredicted RBP7.97□□□□□ -1.13
SNX13-210ENST00000494402 SEZ6LQ9BYH1 1024 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 SMOC1Q9H4F8 434 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 ZNF395Q9H8N7 513 aaPredicted RBP7.97□□□□□ -1.13
SNX13-210ENST00000494402 ATP6V0A4Q9HBG4 840 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 CABP5Q9NP86 173 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 SPTLC3Q9NUV7 552 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 FAM86C1Q9NVL1 165 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 THG1LQ9NWX6 298 aaKnown RBP7.97□□□□□ -1.13
SNX13-210ENST00000494402 KLHL3Q9UH77 587 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 SNCAIPQ9Y6H5 919 aa7.97□□□□□ -1.13
SNX13-210ENST00000494402 SPATA31C2B4DYI2 1134 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 EYA2O00167 538 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 AQP7O14520 342 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 TP53P04637 393 aaPredicted RBP7.96□□□□□ -1.14
SNX13-210ENST00000494402 HOXD8P13378 290 aaPredicted RBP7.96□□□□□ -1.14
SNX13-210ENST00000494402 CDK8P49336 464 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 ROR1Q01973 937 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 PLAURQ03405 335 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 ICA1Q05084 483 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 PCDH1Q08174 1060 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 SFSWAPQ12872 951 aaKnown RBP7.96□□□□□ -1.14
SNX13-210ENST00000494402 LRRC32Q14392 662 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 ACAP2Q15057 778 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 CLUL1Q15846 466 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 CCDC38Q502W7 563 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 SWSAP1Q6NVH7 229 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 ADAMTSL4Q6UY14 1074 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 PDZD4Q76G19 769 aaPredicted RBP7.96□□□□□ -1.14
SNX13-210ENST00000494402 OVCH2Q7RTZ1 564 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 SNX32Q86XE0 403 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 MSL3Q8N5Y2 521 aaKnown RBP7.96□□□□□ -1.14
SNX13-210ENST00000494402 KCTD13Q8WZ19 329 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 SLC5A5Q92911 643 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 SMARCC1Q92922 1105 aaPredicted RBP7.96□□□□□ -1.14
SNX13-210ENST00000494402 FERMT2Q96AC1 680 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 TBC1D20Q96BZ9 403 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 KLHL25Q9H0H3 589 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 GBP3Q9H0R5 595 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 TMEM60Q9H2L4 133 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 TLR7Q9NYK1 1049 aaKnown RBP7.96□□□□□ -1.14
SNX13-210ENST00000494402 GPRC5BQ9NZH0 403 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 CEP131Q9UPN4 1083 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 KCNH4Q9UQ05 1017 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 POLHQ9Y253 713 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 TMEM98Q9Y2Y6 226 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 TACC3Q9Y6A5 838 aa7.96□□□□□ -1.14
SNX13-210ENST00000494402 A0A1W2PNR3 127 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 PABPN1LA6NDY0 278 aaKnown RBP7.95□□□□□ -1.14
SNX13-210ENST00000494402 AREL1O15033 823 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 TBX1O43435 398 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 SOD2P04179 222 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 KRT20P35900 424 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 RNF144AP50876 292 aaPredicted RBP7.95□□□□□ -1.14
SNX13-210ENST00000494402 KCNQ4P56696 695 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 WASHC5Q12768 1159 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 FOXC1Q12948 553 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 MAP1SQ66K74 1059 aaPredicted RBP7.95□□□□□ -1.14
SNX13-210ENST00000494402 ITPRIPL1Q6GPH6 555 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 PPFIBP1Q86W92 1011 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 HSCBQ8IWL3 235 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 KRT78Q8N1N4 520 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 CRACR2BQ8N4Y2 399 aaPredicted RBP7.95□□□□□ -1.14
SNX13-210ENST00000494402 DIS3LQ8TF46 1054 aaKnown RBP7.95□□□□□ -1.14
SNX13-210ENST00000494402 CHTF18Q8WVB6 975 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 HPS3Q969F9 1004 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 FGD4Q96M96 766 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 MAP3K14Q99558 947 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 LSM14BQ9BX40 385 aaKnown RBP7.95□□□□□ -1.14
SNX13-210ENST00000494402 LGR4Q9BXB1 951 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 TOPORSQ9NS56 1045 aaPredicted RBP7.95□□□□□ -1.14
SNX13-210ENST00000494402 NKIRAS2Q9NYR9 191 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 CDC23Q9UJX2 597 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 PCDHA4Q9UN74 947 aa7.95□□□□□ -1.14
SNX13-210ENST00000494402 MAGED1Q9Y5V3 778 aaPredicted RBP7.95□□□□□ -1.14
SNX13-210ENST00000494402 TOR1BO14657 336 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 DDX58O95786 925 aaKnown RBP7.94□□□□□ -1.14
SNX13-210ENST00000494402 SCP2P22307 547 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 ELF1P32519 619 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 HOXD12P35452 270 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 KRT9P35527 623 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 MLLT1Q03111 559 aaPredicted RBP7.94□□□□□ -1.14
SNX13-210ENST00000494402 MAP4K2Q12851 820 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 TAF12Q16514 161 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 DDB1Q16531 1140 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 TDRD10Q5VZ19 366 aaKnown RBP7.94□□□□□ -1.14
SNX13-210ENST00000494402 LILRA6Q6PI73 481 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 POMZP3Q6PJE2 187 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 SPOCD1Q6ZMY3 1216 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 HDXQ7Z353 690 aa7.94□□□□□ -1.14
SNX13-210ENST00000494402 ADAT2Q7Z6V5 191 aaKnown RBP7.94□□□□□ -1.14
SNX13-210ENST00000494402 MIER2Q8N344 545 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms