RNA–Protein interactions for RNA: ENST00000494342.1

TMCO4-207, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 2

Gene TMCO4, Length 503 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-207ENST00000494342 TROAPQ12815 778 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 COL9A3Q14050 684 aaPredicted RBP15.21■□□□□ 0.03
TMCO4-207ENST00000494342 GRM4Q14833 912 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 TMEM240Q5SV17 173 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 ZNF697Q5TEC3 545 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 SKAP1Q86WV1 359 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 MB21D2Q8IYB1 491 aaPredicted RBP15.21■□□□□ 0.03
TMCO4-207ENST00000494342 IGDCC4Q8TDY8 1250 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 RMDN3Q96TC7 470 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 MPHOSPH6Q99547 160 aaKnown RBP15.21■□□□□ 0.03
TMCO4-207ENST00000494342 AMNQ9BXJ7 453 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 SEZ6LQ9BYH1 1024 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 ALDH8A1Q9H2A2 487 aaPredicted RBP15.21■□□□□ 0.03
TMCO4-207ENST00000494342 SEMA6BQ9H3T3 888 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 HIPK3Q9H422 1215 aa15.21■□□□□ 0.03
TMCO4-207ENST00000494342 RBM8AQ9Y5S9 174 aaKnown RBP15.21■□□□□ 0.03
TMCO4-207ENST00000494342 PLXNA1Q9UIW2 1896 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 B4DLN1 442 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 NKRFO15226 690 aaKnown RBP eCLIP15.2■□□□□ 0.02
TMCO4-207ENST00000494342 CYTH3O43739 400 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 MYL3P08590 195 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 HSD17B4P51659 736 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 MRPL12P52815 198 aaKnown RBP15.2■□□□□ 0.02
TMCO4-207ENST00000494342 GHRHRQ02643 423 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 PPIGQ13427 754 aaKnown RBP eCLIP15.2■□□□□ 0.02
TMCO4-207ENST00000494342 RASIP1Q5U651 963 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 RALYLQ86SE5 291 aaKnown RBP15.2■□□□□ 0.02
TMCO4-207ENST00000494342 TMEM199Q8N511 208 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 SLC17A8Q8NDX2 589 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 NCOA7Q8NI08 942 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 VWCEQ96DN2 955 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 MTG1Q9BT17 334 aaPredicted RBP15.2■□□□□ 0.02
TMCO4-207ENST00000494342 NOC4LQ9BVI4 516 aaKnown RBP15.2■□□□□ 0.02
TMCO4-207ENST00000494342 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 GPHNQ9NQX3 736 aaPredicted RBP15.2■□□□□ 0.02
TMCO4-207ENST00000494342 TRMT13Q9NUP7 481 aaKnown RBP15.2■□□□□ 0.02
TMCO4-207ENST00000494342 POLR3EQ9NVU0 708 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 PCDHA1Q9Y5I3 950 aa15.2■□□□□ 0.02
TMCO4-207ENST00000494342 CDH23Q9H251 3354 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 CFBP00751 764 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 EIF2AK2P19525 551 aaKnown RBP15.19■□□□□ 0.02
TMCO4-207ENST00000494342 TTLL4Q14679 1199 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 STXBP2Q15833 593 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 LY6KQ17RY6 165 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 TMEM67Q5HYA8 995 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 SEPT14Q6ZU15 432 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 ZNF365Q70YC5 407 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 PPP1R13LQ8WUF5 828 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 PIGSQ96S52 555 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 IWS1Q96ST2 819 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 CDX2Q99626 313 aaPredicted RBP15.19■□□□□ 0.02
TMCO4-207ENST00000494342 LSG1Q9H089 658 aaKnown RBP15.19■□□□□ 0.02
TMCO4-207ENST00000494342 WNT8AQ9H1J5 351 aa15.19■□□□□ 0.02
TMCO4-207ENST00000494342 NR3C2P08235 984 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 HOXA13P31271 388 aaPredicted RBP15.18■□□□□ 0.02
TMCO4-207ENST00000494342 CCL23P55773 120 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 ARHGAP1Q07960 439 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 WTAPQ15007 396 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 ARHGEF16Q5VV41 709 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 HOMER1Q86YM7 354 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 AFG1LQ8WV93 481 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 IL23AQ9NPF7 189 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 PXMP2Q9NR77 195 aa15.18■□□□□ 0.02
TMCO4-207ENST00000494342 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.17■□□□□ 0.02
TMCO4-207ENST00000494342 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.17■□□□□ 0.02
TMCO4-207ENST00000494342 ERICH2A1L162 156 aa15.17■□□□□ 0.02
TMCO4-207ENST00000494342 GRXCR1A8MXD5 290 aa15.17■□□□□ 0.02
TMCO4-207ENST00000494342 EIF3JO75822 258 aaKnown RBP15.17■□□□□ 0.02
TMCO4-207ENST00000494342 RGS20O76081 388 aa15.17■□□□□ 0.02
TMCO4-207ENST00000494342 CYP2C9P11712 490 aa15.17■□□□□ 0.02
TMCO4-207ENST00000494342 SART3Q15020 963 aaKnown RBP15.17■□□□□ 0.02
TMCO4-207ENST00000494342 BRDTQ58F21 947 aaPredicted RBP15.17■□□□□ 0.02
TMCO4-207ENST00000494342 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
TMCO4-207ENST00000494342 LY9Q9HBG7 655 aa15.17■□□□□ 0.02
TMCO4-207ENST00000494342 CXXC1Q9P0U4 656 aaPredicted RBP15.17■□□□□ 0.02
TMCO4-207ENST00000494342 DDX41Q9UJV9 622 aaKnown RBP15.17■□□□□ 0.02
TMCO4-207ENST00000494342 PNMA6FA0A0J9YX94 578 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 KPNA6O60684 536 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 MMP3P08254 477 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 DNAJB2P25686 324 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 NFRKBQ6P4R8 1299 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 PSRC1Q6PGN9 363 aaPredicted RBP15.16■□□□□ 0.02
TMCO4-207ENST00000494342 CATIPQ7Z7H3 387 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 IL31RAQ8NI17 732 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 HERVK_113Q902F9 699 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 KAT2BQ92831 832 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 PDCD2LQ9BRP1 358 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 MYL10Q9BUA6 226 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 LRRC37A2A6NM11 1700 aa15.16■□□□□ 0.02
TMCO4-207ENST00000494342 EYSQ5T1H1 3165 aa15.15■□□□□ 0.02
TMCO4-207ENST00000494342 TMEM265A0A087WTH1 108 aa15.15■□□□□ 0.02
TMCO4-207ENST00000494342 SLC27A2O14975 620 aa15.15■□□□□ 0.02
TMCO4-207ENST00000494342 PRC1O43663 620 aa15.15■□□□□ 0.02
TMCO4-207ENST00000494342 GH1P01241 217 aa15.15■□□□□ 0.02
TMCO4-207ENST00000494342 SUPT20HL2P0C7V6 817 aa15.15■□□□□ 0.02
TMCO4-207ENST00000494342 PBX2P40425 430 aa15.15■□□□□ 0.02
TMCO4-207ENST00000494342 NECTIN1Q15223 517 aa15.15■□□□□ 0.02
TMCO4-207ENST00000494342 VSIG10LQ86VR7 867 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms