RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CANXP27824 592 aaKnown RBP3.49□□□□□ -1.85
LMNB1-207ENST00000494185 GRIA2P42262 883 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 MAPKAPK2P49137 400 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 GFRA1P56159 465 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 KIZQ2M2Z5 673 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 C2orf27AQ580R0 203 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 WWC2Q6AWC2 1192 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 CIAPIN1Q6FI81 312 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 NSMFQ6X4W1 530 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 MAMDC2Q7Z304 686 aaPredicted RBP3.49□□□□□ -1.85
LMNB1-207ENST00000494185 SCUBE1Q8IWY4 988 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 SYNPOQ8N3V7 929 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 ZBTB38Q8NAP3 1195 aaPredicted RBP3.49□□□□□ -1.85
LMNB1-207ENST00000494185 DCAF4Q8WV16 495 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 SEC14L1Q92503 715 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 KCNN1Q92952 543 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 TRMT2BQ96GJ1 504 aaKnown RBP3.49□□□□□ -1.85
LMNB1-207ENST00000494185 LIN37Q96GY3 246 aaPredicted RBP3.49□□□□□ -1.85
LMNB1-207ENST00000494185 TMEM169Q96HH4 297 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 PUS7Q96PZ0 661 aaKnown RBP3.49□□□□□ -1.85
LMNB1-207ENST00000494185 JMJD8Q96S16 334 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 IER2Q9BTL4 223 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 TNFRSF12AQ9NP84 129 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 GPR27Q9NS67 375 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 CLEC1BQ9P126 229 aa3.49□□□□□ -1.85
LMNB1-207ENST00000494185 NUDT19A8MXV4 375 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 H7BY64 318 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 ADCY3O60266 1144 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 CYP7B1O75881 506 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 CLSTN1O94985 981 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 CAPNS1P04632 268 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 THBDP07204 575 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 FAM153BP0C7A2 387 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 PABPC1P11940 636 aaKnown RBP3.48□□□□□ -1.85
LMNB1-207ENST00000494185 HSP90B1P14625 803 aaKnown RBP3.48□□□□□ -1.85
LMNB1-207ENST00000494185 TRHRP34981 398 aaPredicted RBP3.48□□□□□ -1.85
LMNB1-207ENST00000494185 SLC6A11P48066 632 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 ERVFC1P60507 584 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 SRSF3P84103 164 aaKnown RBP3.48□□□□□ -1.85
LMNB1-207ENST00000494185 SPIRE1Q08AE8 756 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 LSAMPQ13449 338 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 TESK1Q15569 626 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 SF1Q15637 639 aaKnown RBP3.48□□□□□ -1.85
LMNB1-207ENST00000494185 ZNF385BQ569K4 471 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 FAM47CQ5HY64 1035 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 OGFOD2Q6N063 350 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 CYP4F22Q6NT55 531 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 SYDE1Q6ZW31 735 aaPredicted RBP3.48□□□□□ -1.85
LMNB1-207ENST00000494185 USP53Q70EK8 1073 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 TMC6Q7Z403 805 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 RIOX2Q8IUF8 465 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 TRIM48Q8IWZ4 208 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 SIRT2Q8IXJ6 389 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 IFNL3Q8IZI9 196 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 LILRB2Q8N423 598 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 TMEM145Q8NBT3 493 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.48□□□□□ -1.85
LMNB1-207ENST00000494185 WRNIP1Q96S55 665 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 EPB41L1Q9H4G0 881 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 ZNF552Q9H707 407 aaPredicted RBP3.48□□□□□ -1.85
LMNB1-207ENST00000494185 GPRC5CQ9NQ84 441 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 MARCH2Q9P0N8 246 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 EBF1Q9UH73 591 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 IRAK3Q9Y616 596 aa3.48□□□□□ -1.85
LMNB1-207ENST00000494185 TRBV23-1A0A0A0MS06 115 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 ZNF503-AS2A6NEH8 195 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 DLX3O60479 287 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 FLT3P36888 993 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 GABREP78334 506 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 PRSS53Q2L4Q9 553 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 YOD1Q5VVQ6 348 aaPredicted RBP3.47□□□□□ -1.85
LMNB1-207ENST00000494185 FYB2Q5VWT5 728 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 ERICH6BQ5W0A0 696 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 PRR23BQ6ZRT6 265 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 MTDHQ86UE4 582 aaKnown RBP3.47□□□□□ -1.85
LMNB1-207ENST00000494185 JMYQ8N9B5 988 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 TMEM52Q8NDY8 209 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 NPLOC4Q8TAT6 608 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 PHOSPHO1Q8TCT1 267 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 SH3TC2Q8TF17 1288 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 FRS2Q8WU20 508 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 ALG3Q92685 438 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 OSBP2Q969R2 916 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 BTG4Q9NY30 223 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 TMA7Q9Y2S6 64 aaKnown RBP3.47□□□□□ -1.85
LMNB1-207ENST00000494185 PTCH2Q9Y6C5 1203 aa3.47□□□□□ -1.85
LMNB1-207ENST00000494185 C7orf72A4D263 438 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 B4E1Z4 1266 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 C22orf46C9J442 243 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 FAM47E-STBD1D6RA91 191 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 F8W031 263 aaPredicted RBP3.46□□□□□ -1.86
LMNB1-207ENST00000494185 FUCA1P04066 466 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 DBHP09172 617 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 GNAT1P11488 350 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 NCAM1P13591 858 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 TACR1P25103 407 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 GPR85P60893 370 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 YBX1P67809 324 aaKnown RBP3.46□□□□□ -1.86
LMNB1-207ENST00000494185 ST5P78524 1137 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms