RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CELF1Q92879 486 aaKnown RBP7.03□□□□□ -1.28
CPSF7-213ENST00000494016 DDX11Q96FC9 970 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 DMRTB1Q96MA1 342 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 PPP1R9BQ96SB3 815 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 SETDB2Q96T68 719 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 CDC5LQ99459 802 aaKnown RBP7.03□□□□□ -1.28
CPSF7-213ENST00000494016 SMG9Q9H0W8 520 aaKnown RBP7.03□□□□□ -1.28
CPSF7-213ENST00000494016 ZFYVE28Q9HCC9 887 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 NCOA5Q9HCD5 579 aaKnown RBP7.03□□□□□ -1.28
CPSF7-213ENST00000494016 INCENPQ9NQS7 918 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 KANSL3Q9P2N6 904 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 CCNL1Q9UK58 526 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-213ENST00000494016 DENND2AQ9ULE3 1009 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 SCN7AQ01118 1682 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 ZNF804BA4D1E1 1349 aa7.02□□□□□ -1.28
CPSF7-213ENST00000494016 WDR19Q8NEZ3 1342 aa7.02□□□□□ -1.28
CPSF7-213ENST00000494016 SALL1Q9NSC2 1324 aa7.02□□□□□ -1.28
CPSF7-213ENST00000494016 GPR182O15218 404 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 PRC1O43663 620 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 PRKAB2O43741 272 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 NID1P14543 1247 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 MAPK1P28482 360 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 GYG1P46976 350 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 AFF1P51825 1210 aaKnown RBP7.02□□□□□ -1.29
CPSF7-213ENST00000494016 RPS8P62241 208 aaKnown RBP7.02□□□□□ -1.29
CPSF7-213ENST00000494016 FGD1P98174 961 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 MAP3K12Q12852 859 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 GRIK5Q16478 980 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 TBC1D10CQ8IV04 446 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 ANKRD18AQ8IVF6 992 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 IFNL3Q8IZI9 196 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 CEP120Q8N960 986 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 IGDCC4Q8TDY8 1250 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 ALKBH8Q96BT7 664 aaKnown RBP7.02□□□□□ -1.29
CPSF7-213ENST00000494016 PLD4Q96BZ4 506 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 TRIM11Q96F44 468 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 FAM84BQ96KN1 310 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-213ENST00000494016 SPACA7Q96KW9 195 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 NYXQ9GZU5 481 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 ARMT1Q9H993 441 aa7.02□□□□□ -1.29
CPSF7-213ENST00000494016 EPB41L4AQ9HCS5 686 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-213ENST00000494016 PTPDC1A2A3K4 754 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 EREGO14944 169 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 FIBPO43427 364 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 LETM1O95202 739 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-213ENST00000494016 MBD4O95243 580 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 APPP05067 770 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 NASPP49321 788 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-213ENST00000494016 HMGN5P82970 282 aaKnown RBP7.01□□□□□ -1.29
CPSF7-213ENST00000494016 TRAPPC3LQ5T215 181 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 NAA16Q6N069 864 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-213ENST00000494016 TPTE2Q6XPS3 522 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 TMC7Q7Z402 723 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 NCAPG2Q86XI2 1143 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 LEO1Q8WVC0 666 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-213ENST00000494016 PGBD1Q96JS3 809 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 FUCA2Q9BTY2 467 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 ZSCAN16Q9H4T2 348 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-213ENST00000494016 SUV39H2Q9H5I1 410 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 RCOR1Q9UKL0 485 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 MYH15Q9Y2K3 1946 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 KIAA1551Q9HCM1 1747 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 ELP1O95163 1332 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 ZMYM6O95789 1325 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 IRS2Q9Y4H2 1338 aa7.01□□□□□ -1.29
CPSF7-213ENST00000494016 CHD4Q14839 1912 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 KLF18A0A0U1RQI7 1052 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 B4E1Z4 1266 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 SH2B2O14492 632 aaPredicted RBP7□□□□□ -1.29
CPSF7-213ENST00000494016 LIG1P18858 919 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 CYP7A1P22680 504 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 KLRK1P26718 216 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 KRT85P78386 507 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 CCDC183Q5T5S1 534 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 ADGRA1Q86SQ6 560 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 NBPF5PQ86XG9 351 aaPredicted RBP7□□□□□ -1.29
CPSF7-213ENST00000494016 FAM43AQ8N2R8 423 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 LCORLQ8N3X6 602 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 FAM184AQ8NB25 1140 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 ZNF384Q8TF68 577 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 SYAP1Q96A49 352 aaPredicted RBP7□□□□□ -1.29
CPSF7-213ENST00000494016 CHMP4CQ96CF2 233 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 PSMD1Q99460 953 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 NIF3L1Q9GZT8 377 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 SCAND2PQ9GZW5 306 aaPredicted RBP7□□□□□ -1.29
CPSF7-213ENST00000494016 TSPY26PQ9H489 355 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 RRAGDQ9NQL2 400 aaPredicted RBP7□□□□□ -1.29
CPSF7-213ENST00000494016 ZSWIM5Q9P217 1185 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 NEDD4P46934 1319 aa7□□□□□ -1.29
CPSF7-213ENST00000494016 COL1A1P02452 1464 aaPredicted RBP6.99□□□□□ -1.29
CPSF7-213ENST00000494016 CACNA1SQ13698 1873 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 H3BQV1 296 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 PROCP04070 461 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 ITGB2P05107 769 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 HSPA6P17066 643 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 GNAT2P19087 354 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 COL8A1P27658 744 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 RFC4P35249 363 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 ATP11AP98196 1134 aa6.99□□□□□ -1.29
CPSF7-213ENST00000494016 CCDC173Q0VFZ6 552 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms