RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 PHF20Q9BVI0 1012 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 SEMA6BQ9H3T3 888 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 EMC7Q9NPA0 242 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 FAM105AQ9NUU6 356 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 GFOD1Q9NXC2 390 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 PCDHA8Q9Y5H6 950 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 ACTL7BQ9Y614 415 aa5.72□□□□□ -1.49
GTF3A-208ENST00000493903 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.71□□□□□ -1.5
GTF3A-208ENST00000493903 VSTM5A8MXK1 200 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 TRAF5O00463 557 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 ERC2O15083 957 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 SIGLEC6O43699 453 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 DYRK3O43781 588 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 VAMP4O75379 141 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 CFBP00751 764 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 GSNP06396 782 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 CYP2C19P33261 490 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 MECP2P51608 486 aaKnown RBP5.71□□□□□ -1.5
GTF3A-208ENST00000493903 SCRN1Q12765 414 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 PAK1Q13153 545 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 RALBP1Q15311 655 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 ABCB5Q2M3G0 1257 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 FDX2Q6P4F2 183 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 ZC3H7AQ8IWR0 971 aaKnown RBP5.71□□□□□ -1.5
GTF3A-208ENST00000493903 PPIL6Q8IXY8 311 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 CPA6Q8N4T0 437 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 C12orf50Q8NA57 414 aaPredicted RBP5.71□□□□□ -1.5
GTF3A-208ENST00000493903 CHST14Q8NCH0 376 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 NPLOC4Q8TAT6 608 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 PANK1Q8TE04 598 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 AHCYL2Q96HN2 611 aaKnown RBP5.71□□□□□ -1.5
GTF3A-208ENST00000493903 NUP88Q99567 741 aaPredicted RBP5.71□□□□□ -1.5
GTF3A-208ENST00000493903 ALG1Q9BT22 464 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 SARGQ9BW04 601 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 CEP41Q9BYV8 373 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 RCAN3Q9UKA8 241 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 WASHC2AQ641Q2 1341 aa5.71□□□□□ -1.5
GTF3A-208ENST00000493903 FZD9O00144 591 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 WNT9AO14904 365 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 GSTA4O15217 222 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 MEFVO15553 781 aaPredicted RBP5.7□□□□□ -1.5
GTF3A-208ENST00000493903 SLITRK5O94991 958 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 CKMP06732 381 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 THBDP07204 575 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 MYBL2P10244 700 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 RBP3P10745 1247 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 DRD2P14416 443 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 PHKG2P15735 406 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 ITGB7P26010 798 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 LTBRP36941 435 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 PREPP48147 710 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 KPNA1P52294 538 aaPredicted RBP5.7□□□□□ -1.5
GTF3A-208ENST00000493903 TCIRG1Q13488 830 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 GBX1Q14549 363 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 ARHGAP44Q17R89 818 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 TMEM177Q53S58 311 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 CWF19L1Q69YN2 538 aaKnown RBP5.7□□□□□ -1.5
GTF3A-208ENST00000493903 IQCEQ6IPM2 695 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 ARMC10Q8N2F6 343 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 FRS2Q8WU20 508 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 FAM46AQ96IP4 442 aaKnown RBP5.7□□□□□ -1.5
GTF3A-208ENST00000493903 AIFM3Q96NN9 605 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 GPR101Q96P66 508 aaPredicted RBP5.7□□□□□ -1.5
GTF3A-208ENST00000493903 ACSS3Q9H6R3 686 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 CHST7Q9NS84 486 aa5.7□□□□□ -1.5
GTF3A-208ENST00000493903 ANO9A1A5B4 782 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 WDR64B1ANS9 1081 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 AURKAO14965 403 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 IFIT2P09913 472 aaKnown RBP5.69□□□□□ -1.5
GTF3A-208ENST00000493903 H2AFB1P0C5Y9 115 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 H2AFB2P0C5Z0 115 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 PF4V1P10720 104 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 NOP2P46087 812 aaKnown RBP5.69□□□□□ -1.5
GTF3A-208ENST00000493903 KCNAB2Q13303 367 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 PICALMQ13492 652 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 SNW1Q13573 536 aaKnown RBP5.69□□□□□ -1.5
GTF3A-208ENST00000493903 DPY19L1Q2PZI1 675 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 FAM47CQ5HY64 1035 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 LBX2Q6XYB7 198 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 PRR23CQ6ZRP0 262 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 TPH2Q8IWU9 490 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 PJA1Q8NG27 643 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 PCDH19Q8TAB3 1148 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 ENOX1Q8TC92 643 aaKnown RBP5.69□□□□□ -1.5
GTF3A-208ENST00000493903 USP33Q8TEY7 942 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 CHTF18Q8WVB6 975 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 UTP4Q969X6 686 aaKnown RBP5.69□□□□□ -1.5
GTF3A-208ENST00000493903 CLIP3Q96DZ5 547 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 PSMG3-AS1Q96PY0 264 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 ARPC5LQ9BPX5 153 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 ASCC2Q9H1I8 757 aaPredicted RBP5.69□□□□□ -1.5
GTF3A-208ENST00000493903 PRDM10Q9NQV6 1147 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 SPTLC3Q9NUV7 552 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 THG1LQ9NWX6 298 aaKnown RBP5.69□□□□□ -1.5
GTF3A-208ENST00000493903 KCNH3Q9ULD8 1083 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 BACE2Q9Y5Z0 518 aa5.69□□□□□ -1.5
GTF3A-208ENST00000493903 C2orf71A6NGG8 1288 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 H0Y8X5 98 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 SART1O43290 800 aaKnown RBP5.68□□□□□ -1.5
GTF3A-208ENST00000493903 PPFIA4O75335 1185 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms