RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 MAP4K2Q12851 820 aa5.85□□□□□ -1.47
CD46-217ENST00000493796 HSP90AA2PQ14568 343 aaPredicted RBP5.85□□□□□ -1.47
CD46-217ENST00000493796 SLC35F1Q5T1Q4 408 aa5.85□□□□□ -1.47
CD46-217ENST00000493796 DENND5AQ6IQ26 1287 aa5.85□□□□□ -1.47
CD46-217ENST00000493796 PPIL6Q8IXY8 311 aa5.85□□□□□ -1.47
CD46-217ENST00000493796 LRRC56Q8IYG6 542 aaPredicted RBP5.85□□□□□ -1.47
CD46-217ENST00000493796 PLEKHO2Q8TD55 490 aa5.85□□□□□ -1.47
CD46-217ENST00000493796 USP33Q8TEY7 942 aa5.85□□□□□ -1.47
CD46-217ENST00000493796 ZNF669Q96BR6 464 aaPredicted RBP5.85□□□□□ -1.47
CD46-217ENST00000493796 SIGLEC10Q96LC7 697 aa5.85□□□□□ -1.47
CD46-217ENST00000493796 MARCH2Q9P0N8 246 aa5.85□□□□□ -1.47
CD46-217ENST00000493796 PCDHA5Q9Y5H7 936 aa5.85□□□□□ -1.47
CD46-217ENST00000493796 IRS4O14654 1257 aaPredicted RBP5.84□□□□□ -1.47
CD46-217ENST00000493796 PDPK1O15530 556 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 LTBRP36941 435 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
CD46-217ENST00000493796 SSPNQ14714 243 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 SF3A1Q15459 793 aaKnown RBP5.84□□□□□ -1.47
CD46-217ENST00000493796 WWC2Q6AWC2 1192 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 IGDCC3Q8IVU1 814 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 ZSCAN18Q8TBC5 510 aaPredicted RBP5.84□□□□□ -1.47
CD46-217ENST00000493796 KCTD13Q8WZ19 329 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 AARSD1Q9BTE6 412 aaKnown RBP5.84□□□□□ -1.47
CD46-217ENST00000493796 IER2Q9BTL4 223 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 CCDC113Q9H0I3 377 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 RXFP1Q9HBX9 757 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 ARHGEF4Q9NR80 690 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 SIRPGQ9P1W8 387 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 DBR1Q9UK59 544 aaKnown RBP5.84□□□□□ -1.47
CD46-217ENST00000493796 CNOT6Q9ULM6 557 aaKnown RBP5.84□□□□□ -1.47
CD46-217ENST00000493796 KCTD3Q9Y597 815 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 TIMM13Q9Y5L4 95 aaPredicted RBP5.84□□□□□ -1.47
CD46-217ENST00000493796 IRAK3Q9Y616 596 aa5.84□□□□□ -1.47
CD46-217ENST00000493796 DLX3O60479 287 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 NTRK1P04629 796 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 FBLN1P23142 703 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 NCKAP1LP55160 1127 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 SERINC3Q13530 473 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 RASGRF1Q13972 1273 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 CIAPIN1Q6FI81 312 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 TEX2Q8IWB9 1127 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 TMEFF1Q8IYR6 380 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 LRRC47Q8N1G4 583 aaKnown RBP5.83□□□□□ -1.48
CD46-217ENST00000493796 Q8N1Y9 231 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 RCBTB1Q8NDN9 531 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 TSPAN17Q96FV3 270 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 PEX11GQ96HA9 241 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 BTG4Q9NY30 223 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 NUDT5Q9UKK9 219 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 PLA2G2DQ9UNK4 145 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 NPFFR2Q9Y5X5 522 aa5.83□□□□□ -1.48
CD46-217ENST00000493796 C22orf46C9J442 243 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 RFXAPO00287 272 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 MYO1BO43795 1136 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 NUAK1O60285 661 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 FGFR1P11362 822 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 LCP1P13796 627 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 PI3P19957 117 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 BCL6P41182 706 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 GTF2A2P52657 109 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 ZNF385BQ569K4 471 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 SPATC1Q76KD6 591 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 NLRP10Q86W26 655 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 EPB41L4AQ9HCS5 686 aaPredicted RBP5.82□□□□□ -1.48
CD46-217ENST00000493796 FBXL7Q9UJT9 491 aa5.82□□□□□ -1.48
CD46-217ENST00000493796 TRAV20A0A0B4J274 112 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 CCDC85CA6NKD9 419 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 PRODHO43272 600 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 BUB1BO60566 1050 aaPredicted RBP5.81□□□□□ -1.48
CD46-217ENST00000493796 ZBTB7AO95365 584 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 PABPC1P11940 636 aaKnown RBP5.81□□□□□ -1.48
CD46-217ENST00000493796 PFKLP17858 780 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 IGFBP6P24592 240 aaPredicted RBP5.81□□□□□ -1.48
CD46-217ENST00000493796 FPR2P25090 351 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 SLC9A5Q14940 896 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 TARBP2Q15633 366 aaKnown RBP5.81□□□□□ -1.48
CD46-217ENST00000493796 MTERF2Q49AM1 385 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 CEP68Q76N32 757 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 DCP2Q8IU60 420 aaKnown RBP5.81□□□□□ -1.48
CD46-217ENST00000493796 RIOX2Q8IUF8 465 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 PANK1Q8TE04 598 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 ALG3Q92685 438 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 OSBP2Q969R2 916 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 SPATA9Q9BWV2 254 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 IRF2BPLQ9H1B7 796 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 SIT1Q9Y3P8 196 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 PCDHA2Q9Y5H9 948 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 X6R8D5 127 aa5.81□□□□□ -1.48
CD46-217ENST00000493796 ASGR2P07307 311 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 ZSCAN22P10073 491 aaPredicted RBP5.8□□□□□ -1.48
CD46-217ENST00000493796 LSAMPQ13449 338 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 RASA3Q14644 834 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 MROH9Q5TGP6 573 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 YOD1Q5VVQ6 348 aaPredicted RBP5.8□□□□□ -1.48
CD46-217ENST00000493796 NSMFQ6X4W1 530 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 SPOCD1Q6ZMY3 1216 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 LCNL1Q6ZST4 164 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms